Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0480 ATGGAATGCAGAAATTATTGCCACACGGCAAAAGTGGGCTCCACGTCATTACTATTAAAGTACAATGATTCTGACAATTTGAAAAGTCATACTCGATTTCCACAAAGACTTGATTGTTTGTTGAGCTTGCCTATTTCCTTGCAAGCAATGTTAGCAATTGGAGGCTTTGAACTTGCATGCATCTTTCTCTTTTGGTGTCTGACATGGAAAAAGTCAAGTAAGCAGCAGAATTACGATCATCTTACTGGAACTGGGTTCGGAAAATACAGCTACTCTGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGAACACTAAAGGATGGGCGAGTTGCTGCAATCAAGAGACTCAACGAAGCAAATCAAATAGAAAGCGAGTTTCTCGCAGAAGTCAACTTAATAGGAAGGTTGAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAAGGAAAGTACAGAATGTTGGTGTATGAGTACATGGAAAACGGAAAAAGCTTGAGGGTGGATGGACCAGATCACTCGCATCATGGGAGGCTAGTGACATGGGTGAGAGACAAGAAGAACAAAGGAGATGGAAAGGCATCATGGGTGGAACAGATTGTGGATCCGACGGTTGAGGGAAGCTTTGAGATGAGGAAGATGGAGGTTTTGATAACAGTGGCATTACAGTGTGTTGTGGAAGACAAGGATGCAAGACCTTCAATGAGTCGCATAGTGGAGATGCTTCAGAGTCATGAAATTGAGTAA 789 0.4284 MECRNYCHTAKVGSTSLLLKYNDSDNLKSHTRFPQRLDCLLSLPISLQAMLAIGGFELACIFLFWCLTWKKSSKQQNYDHLTGTGFGKYSYSELKEATRGFSEEIGRGAGGIVYKGTLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGKSLRVDGPDHSHHGRLVTWVRDKKNKGDGKASWVEQIVDPTVEGSFEMRKMEVLITVALQCVVEDKDARPSMSRIVEMLQSHEIE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0480 262 SUPERFAMILY Protein kinase-like (PK-like) 78 177 IPR011009 -
Lele42g0480 262 FunFam S-receptor-like serine/threonine-protein kinase 68 173 - -
Lele42g0480 262 Pfam Protein kinase domain 102 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0480 262 ProSiteProfiles Protein kinase domain profile. 99 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0480 262 SMART tyrkin_6 101 256 IPR020635 GO:0004713|GO:0006468
Lele42g0480 262 Gene3D Phosphorylase Kinase; domain 1 65 173 - -
Lele42g0480 262 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Lele42g0480 262 PANTHER OS07G0415500 PROTEIN 206 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0480 Lele-ChrLele42 4846386 4849112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0480 89 177 Receptor kinase-like Gene Family AT1G66980 44.944 6.45e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele42g0480 Pkinase 1.2e-13 CL0016