Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0479 ATGTTGGTATTTCAGTTTCCCTTGTTTTTGATGTTGGTGCCAAGTCACAAGTGGATTGATGCCCACAAAAAAGAATTTATTGCTCATTCTAAATTGAAAATTATTGCAACACGGCAAAAGTGGGCTCCACGTCATTACTATTACGAGTACAATACTTCAGAAAATTTGAAAAGTCATACTCGGTTTCCACAAAGACTTGATTGTTTGTTGACCTTGCCTATTTCCTTGCAAGCAATGTTAGCAATTGGAGGCTTTGAACTTGCATGCATGTTTCTCTTTTGGTGTTTGACATGGCAAAAGTCAAGTAAGCAGCAGAATTACGATCATCTTACTGGAACTGGGTTCAGAAAATACAGCTACTCTGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGAACACTAAAGGATGGGCGAGTTGCTGCAATCAAGAGACTCAACGAAGCAAATCAAATAGAAAGCGAGTTTCTCGCAGAAGTCAACTTAATAGGAAGGCTGAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAAGGAAAGTACAGAATGTTGGTGTATGAGTACATGGAAAACGGAAAAAGCTTGAGGGTGGATGGACCAGATCACTTGCATCATGGGAGGCTAGTGACATGGGTGAGAGACAAGAAGAACAAAGGAGATGGAAAGGCATCATGGGTGGAACAAATTGTGGATCCGACGGTTGATGGAAGCTTTGAGATGAGGAAGATGGAGGTTTTGATAACAGTGGCATTACAGTGTGTTGTCGAAGACAAGGATGCGAGACCTTCAATGAGTCGCATAGTGGAGATGCTTCAAAGTCATGAAATTGAGTATCGATTTTCAGTGTGA 891 0.4164 MLVFQFPLFLMLVPSHKWIDAHKKEFIAHSKLKIIATRQKWAPRHYYYEYNTSENLKSHTRFPQRLDCLLTLPISLQAMLAIGGFELACMFLFWCLTWQKSSKQQNYDHLTGTGFRKYSYSELKEATRGFSEEIGRGAGGIVYKGTLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGKSLRVDGPDHLHHGRLVTWVRDKKNKGDGKASWVEQIVDPTVDGSFEMRKMEVLITVALQCVVEDKDARPSMSRIVEMLQSHEIEYRFSV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0479 296 Pfam Protein kinase domain 131 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0479 296 PANTHER OS07G0415500 PROTEIN 235 287 - -
Lele42g0479 296 SUPERFAMILY Protein kinase-like (PK-like) 105 206 IPR011009 -
Lele42g0479 296 ProSiteProfiles Protein kinase domain profile. 128 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0479 296 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Lele42g0479 296 FunFam S-receptor-like serine/threonine-protein kinase 97 202 - -
Lele42g0479 296 Gene3D Phosphorylase Kinase; domain 1 94 202 - -
Lele42g0479 296 SMART tyrkin_6 130 285 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0479 Lele-ChrLele42 4839165 4842847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0479 114 218 Receptor kinase-like Gene Family AT3G19300 49.057 4.01e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele42g0479 Pkinase 1.9e-13 CL0016