Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0476 ATGGCCTCCTCCTTCCTCACTCTCCCAAAACCTTTTCTTTGCCCGCCTAAGGCTACCTTCTCTTCCTCTGACCGCAAACTTGCTGGTTTGCGGAAGAACTCGTTGAGGGTTAATGCAATTGTGAAGAAATGGGAACCCACAAAGGTGGTTCCGCAGGCTGACAGAGTTCTTGTTCGTTTGGATGAGCTTGAACAAAAAACTACTGGTGGAGTTTTGTTGCCAAAGTCAGCTGTGAAGTTTGAGCGATATCTAATGGGAGAAATTCTTTCTGTTGGTGCAGATGTTCAAGAAGTAGAGGCAGGCAAGAAGGTTTTATTCTCAGACATGAGTGCTTACGAGGTGGATTTGGGGACTGATGTAAAGCACTGCTTCTGTAAAGCAAGTGATTTATTGGCTGTGGTTGAGTAG 408 0.4559 MASSFLTLPKPFLCPPKATFSSSDRKLAGLRKNSLRVNAIVKKWEPTKVVPQADRVLVRLDELEQKTTGGVLLPKSAVKFERYLMGEILSVGADVQEVEAGKKVLFSDMSAYEVDLGTDVKHCFCKASDLLAVVE 135
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0476 135 SMART Cpn10_2 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 CDD cpn10 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 PANTHER 10 KDA HEAT SHOCK PROTEIN 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 SUPERFAMILY GroES-like 48 135 IPR011032 -
Lele42g0476 135 FunFam 10 kDa chaperonin 44 135 - -
Lele42g0476 135 Pfam Chaperonin 10 Kd subunit 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 Gene3D GroES chaperonin 44 135 IPR037124 GO:0006457
Lele42g0476 135 PRINTS 10kDa chaperonin signature 49 64 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 PRINTS 10kDa chaperonin signature 99 111 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 PRINTS 10kDa chaperonin signature 73 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele42g0476 135 PRINTS 10kDa chaperonin signature 121 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele42g0476 Lele-ChrLele42 4774668 4778452 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0476 47 135 Calmodulin-binding Proteins AT5G20720 34.694 3.91e-11 57.0