Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0471 ATGCTTTGGGAGGATCTATCCAACGTGGTTTTAAGTGCTACGAGTCTAAAATTAGACTCACCATGCATGTTGGAGCATGTAATGCTACCAGTGGGAACTGGTTTCTTAGCAATATGGTTGATCCAAATGATAATGGAAATTGTGGAACGGATGAGGAAGAAGAAGAACAAGGTCTCAGAACAGAACACAGAGATTCTTCATCCCAATGTGCTGAAGTATGGTTTAGCTTACAAAACCAGTATATTTTGCAGCACTTTACTGCTTGCAATTCATATCTTGTTGCTTCTGATGATGGTAAAAGTTCAAACTCAGGGCAATTCAAAACTTATGGCTTTTACATCAGAAACAGTTATGGTATTAGTATGGGCAATTGCATTGGTAACAGTGTGGAAGTTTCCAAAAATCAATGTTAAGTTCCCTTTGATGCTAAGATCATGGTGGATTTGCAGCTTCTTTTTGTGTATTATCAACTTAGGGTTTCATAGCCATTTCAATATCAGCAAAAGGACACAGATTGGATTCAGGGAATATGCAGATTTGCTTGGCTTGCTTGCTTCAACAGTTCTATTGGGAATTTCTATAAGGGGAAGAACTGGGATTGTAGTGATTGCTACAGATGGAATCTCTGAGCCACTTTTGAGGAAGAAAACTGGAAAAGATTCAGAATCTTCCAAAAGGGAATCTTTATATGGGAAATCTACTTTCATTCAACTCATTACTTTCTCATGGCTCAATCCTTTGTTTGCAGTAGGGTATAAGAAAGCTCTTGAACAGAGTGATATTCCTGACGTTGCCATTGAGGATTCTGCAGATTTTCTATCTTCATGCTTTGATGAGAGCCTTAGAAAAGTCAAGGAAGCCGATGGAACCACAAATCCATCTGTTTACAAAGCAATTTATCTATTTGCTAGGAAGAAGACTTTGATCAATGCTTGTTTTGCAGTAGTAAGTGCTGCAGCATCCTATGTTGGCCCATACCTAATCACTGACTTTGTGAGTTTCCTCGCCGATAAGGGAACCCGCGGGTTGAATGAAGGATACTTATTGTCTCTTGGATTCTTATGTGCCAAAATGATCGAGACAATAACTCAGAGGCAATGGATTTTTGGTGCTCGCCAAGCGGGTCTTCGCCTTAGAGTGGCGTTGATTGCTGTTGATGCTCATACCGGAAGCCATCTCTTCAAGGAGTGCCTTATGGGAGTTCTTAGAGAAAAAGCTATACTTTATGTTACCCATCAAGTGGAGTTTCTTCCAGCAGCGGATCTTATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACCTTTGAACAACTTCTAAAGCAAAATATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTGGAGTCAATTCTCATGGTTGAGAATTCAAGCAGAACAACTCTAAACCCGGCACCTGAAGGTGAACCAAATGTCAATTCTCAGTCAAAATCAGAACTTTCTCCCACTCAACATAACAACACAGAGCAAGGAAATCCCCCAGAGATCAAAGAGAAAGAAGGTAAACTTATGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCTAGAGAAGTTTACTGGACCTATTTAACCACTGTCAAAAGGGGTGCCATAGTTCCTGTAATACTTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCAAGTAACTACTGGATGGCTTGGGTTTGCCCTACATCAAGTGATGCTAAGCCAACATTTGACATGGATTTCATACTTCTTGTTTATATGGTACTTTCTATTGGGAGTGCACTTTGTGTTCTCCTAAGAGCCATATTAGTAGCAAAAACTGGACTTTGGACTGCACAAAAACTATTTGTCAATATGTTGCATAGTATTCTTCGAGCACCGATGTCATTTTTCGATTCAACTCCAAATGGCAGAATTTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAACCAAACTAGGCTGGTGTGCTTTCTCAATAATACAGATTCTGGGTACCATTGCAGTAATGTCACAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCGGTAACCGCGGTCTGCGTATGGTATCAAAGATACTATACACCAACAGCAAGAGAACTGGCTCGCTTGTCACAAATACAGATAGCTCCAATTCTGCATCATTTTGCAGAATCGTTAGCAGGAGTAGCATCGATTCGAGCTTTCGATCAAGAAAGCCGTTTTGTATATTCAAATCTTGATCTTGTTGACAACTACTCAAAACCATGGTTCCATAATGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTTTTCGCCTTCTCTCTGGTTTTGCTTGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAATTTGAATGTACTGCAAGCTTCAGCGATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATCTCAAAAGTGAAGCAGCTCTTGTTATTGAAGATTCTAGGCCACCAAACAACTGGCCCGAAATTGGAACAATATGTTTCAAAAACCTGCAGATACGTTATGCTGAACATCTACCATCTGTTCTGAAGAACATCAATTGCACATTTCCCGGAAGGAAGAAAATCGGTGTGGTGGGACGAACCGGGAGTGGAAAATCGACCCTAATACAGGCCATTTTCAGGGTTGTTGAACCTTGGGAAGGAAGCATTATAATTGATGATTTGGATATATGTAAGATTGGTCTACATGACTTAAGGTTGAGACTTAGCATAATTCCACAGGATCCCACAATGTTTGAAGGCACAGTTAGAGGAAACTTGGACCCACTTGAGCAGTACTCTGACAAGCAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAGGCCTCAGTGGTTGAAAATGGAGAAAACTGGAGTGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAGCATACTTGTGCTAGATGAAGCAACAGCATCAATTGATTCTGCAACTGATGGAGTTCTACATAAGATCATCAGTCAAGAATTCAAAGATAGAACTGTTGTCACAATAGCCCATCGAATCCATACTGTTATCGATAGCGATTTGGTTTTGGTTCTAAGTGATGGGAAAATCGCGGAGTTCGATGCACCATCGAAGTTAATTGAAAGAGAAGATTCCTTCTTTTCTAAACTCATAAGGGAGTACTCAAGAAGATCACAGAGTTTCAACAGCTTGGCCACTCAAAATGGCCCAATAAACAGAATAAGTTGA 3357 0.4039 MLWEDLSNVVLSATSLKLDSPCMLEHVMLPVGTGFLAIWLIQMIMEIVERMRKKKNKVSEQNTEILHPNVLKYGLAYKTSIFCSTLLLAIHILLLLMMVKVQTQGNSKLMAFTSETVMVLVWAIALVTVWKFPKINVKFPLMLRSWWICSFFLCIINLGFHSHFNISKRTQIGFREYADLLGLLASTVLLGISIRGRTGIVVIATDGISEPLLRKKTGKDSESSKRESLYGKSTFIQLITFSWLNPLFAVGYKKALEQSDIPDVAIEDSADFLSSCFDESLRKVKEADGTTNPSVYKAIYLFARKKTLINACFAVVSAAASYVGPYLITDFVSFLADKGTRGLNEGYLLSLGFLCAKMIETITQRQWIFGARQAGLRLRVALIAVDAHTGSHLFKECLMGVLREKAILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNIGFEVLVGAHSQALESILMVENSSRTTLNPAPEGEPNVNSQSKSELSPTQHNNTEQGNPPEIKEKEGKLMQDEERERGSISREVYWTYLTTVKRGAIVPVILLAQSSFQVLQVASNYWMAWVCPTSSDAKPTFDMDFILLVYMVLSIGSALCVLLRAILVAKTGLWTAQKLFVNMLHSILRAPMSFFDSTPNGRILNRASTDQSVLDLEMATKLGWCAFSIIQILGTIAVMSQVAWQVFVIFIPVTAVCVWYQRYYTPTARELARLSQIQIAPILHHFAESLAGVASIRAFDQESRFVYSNLDLVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASAIWNICNAENKMISVERIIQYSNLKSEAALVIEDSRPPNNWPEIGTICFKNLQIRYAEHLPSVLKNINCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPWEGSIIIDDLDICKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKQVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSILVLDEATASIDSATDGVLHKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGKIAEFDAPSKLIEREDSFFSKLIREYSRRSQSFNSLATQNGPINRIS 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0471 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 852 1091 IPR027417 -
Lele42g0471 1118 CDD ABC_6TM_ABCC_D2 542 836 IPR044726 GO:0140359
Lele42g0471 1118 CDD ABCC_MRP_domain2 859 1079 - -
Lele42g0471 1118 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 863 1095 IPR003439 GO:0005524
Lele42g0471 1118 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 544 824 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0471 1118 Pfam ABC transporter transmembrane region 553 788 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0471 1118 Gene3D - 843 1097 IPR027417 -
Lele42g0471 1118 Gene3D - 381 468 IPR027417 -
Lele42g0471 1118 MobiDBLite consensus disorder prediction 470 501 - -
Lele42g0471 1118 SUPERFAMILY ABC transporter transmembrane region 530 841 IPR036640 GO:0005524|GO:0016020
Lele42g0471 1118 Pfam ABC transporter 878 1026 IPR003439 GO:0005524
Lele42g0471 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 446 IPR027417 -
Lele42g0471 1118 SMART AAA_5 887 1079 IPR003593 -
Lele42g0471 1118 MobiDBLite consensus disorder prediction 502 519 - -
Lele42g0471 1118 MobiDBLite consensus disorder prediction 470 519 - -
Lele42g0471 1118 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 382 1098 - -
Lele42g0471 1118 FunFam ABC transporter C family member 5 505 842 - -
Lele42g0471 1118 FunFam ABC transporter C family member 3 844 1096 - -
Lele42g0471 1118 Gene3D ABC transporter type 1, transmembrane domain 505 842 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0471 Lele-ChrLele42 4678359 4688656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0471 878 1095 Calmodulin-binding Proteins AT2G36910 29.661 7.96e-30 126