Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0460 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTTCATCATCATCAGCTTCAACGCCCTAATTTTCAATCCAACCAAGATGATGATGATAACCACGAAGATAGTTCTAACCCTCATGGGCTTAACCCGGCTTGTCCGGGCGATGTAGTTGTTCGCCGGCCTAGGGGTAGGCCGCCCGGATCGAAGAACAAGCAGAAGCCGCCTGTGATAATCACACGCGAGAGCGCCAACGCGCTCCGAGCTCATATTCTTGAGGTTAGCAGCGGCTCCGATGTGTTTGAGTGTGTGGCGACTTATGCAAGGAGGAGACAGCGAGGGATCTGTGTTTTGAGTGGGAGCGGCACCGTCACAAACGTGACAATCCGGCAGCCATCGGCGGCAGGGGCTGTGGCGACACTTCAGGGACGGTTTGAGATACTGTCGCTGTCCGGATCTTTCTTGCCACCTCCAGCTCCCCCGGGAGCGACGAGCCTGAGCGTATTTCTCGCCGGAGGGCAAGGTCAAGTGGTAGGAGGAAATGTTGTCGGCGCGTTGGTGGCGGCTGGGCCAATTATTGTGATTGCTTCTTCATTTACCAACGTAGCATATGAGAGATTGCCATTAGACAACGAGGAAGAACCCTTACCGGTCCAGAACGGCGGCAGTGGCGACAACGGCGGAGACGATGGTAGCCGAGACATGAACGGGTTTCCGAACTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTTTAAACATGTCTCAGTTACCACTTAACGGTAATTGGGTTGAAAATTCTGGTGGAGGAAGATCTCAGCCATATTAA 813 0.5314 MAGLDLGSSQSHHFLHHHQLQRPNFQSNQDDDDNHEDSSNPHGLNPACPGDVVVRRPRGRPPGSKNKQKPPVIITRESANALRAHILEVSSGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSAAGAVATLQGRFEILSLSGSFLPPPAPPGATSLSVFLAGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGGSGDNGGDDGSRDMNGFPNSSSGLPFLNLPLNMSQLPLNGNWVENSGGGRSQPY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0460 270 MobiDBLite consensus disorder prediction 206 237 - -
Lele42g0460 270 PIRSF ESCAROLA 2 268 IPR014476 GO:0003680
Lele42g0460 270 CDD DUF296 83 166 IPR005175 -
Lele42g0460 270 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Lele42g0460 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Lele42g0460 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 212 - -
Lele42g0460 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 222 IPR014476 GO:0003680
Lele42g0460 270 MobiDBLite consensus disorder prediction 24 73 - -
Lele42g0460 270 Gene3D - 82 212 - -
Lele42g0460 270 ProSiteProfiles PPC domain profile profile. 79 217 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0460 Lele-ChrLele42 4394202 4395014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0460 53 270 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 68.349 1.43e-87 260