Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0440 ATGGCTCCAAATACGAAGAAATCTCTGATTCTGATAATATTAGTAATAGCTGTTGCAATGTTGAAAGCTGAAGGTGATGAAGATAATGGTGAGTCCTCCCTTTTAACCAGAACTGTGCTAATTATTAATAAATTATCCAAGAATCAGCCCTTACAATTTCATTGCAAAGATAAGCATCATGATCTTGGAAAGCGTTACCTGGAATATGATCAAATATTTCAATTCAGTTTCGACATTGATCCGTTTCTGCACAGAACTTTGTATTTTTGTAGTTTTTGGTGGCAATCATCTCCAATTCATTACTTTGACATATACGTACAAACACGAGATGGATGCGACGTGTGTGTTTGGTTTATAGTTGAACATGGTCCTTGCTTAGAGGGTGGATGCTATCCTTGGAATTCTCATCCGCAATCACCATTACTTGCTCCTCTTGGTGATGTTAAGTTAAATAGTATCGATATTTCTGATCAGTATCATCCCTGA 486 0.3663 MAPNTKKSLILIILVIAVAMLKAEGDEDNGESSLLTRTVLIINKLSKNQPLQFHCKDKHHDLGKRYLEYDQIFQFSFDIDPFLHRTLYFCSFWWQSSPIHYFDIYVQTRDGCDVCVWFIVEHGPCLEGGCYPWNSHPQSPLLAPLGDVKLNSIDISDQYHP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0440 161 Pfam Plant self-incompatibility protein S1 38 126 IPR010264 -
Lele42g0440 161 PANTHER - 37 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0440 Lele-ChrLele42 4125600 4126085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0440 38 136 Carbohydrate Esterase AT3G16970 40.179 2.49e-19 77.4