Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0428 ATGAATCGATTGGAAGAGAACACTATAGCTTCATGCAGATGGAAGAAGTCCCTCTATCCTGATAGGAAAGGGAGCTTTACTGTAGAAGAAGATGAGCGCTTGATAGTGGCTATCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAGATTTGTTCTGGGCCGGACTCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTGAGGAAGAAGATTCGAGATTGAAAAAAGCAATTGCCAAATATGGATTCTGCTGGTCAAAGGTTGCTGCCTATGTGCCTCCACGAACTGACAGTCAATGCAGGAATTTTGGCTCTGATCAGAAGATGGCGGATCCACCATCTGATCCAGATGCTGTGAACCTCCCTCAGAAGCAGAAGAGTATGTCAAGCAATGCTTCTGAGAAAAAGAGGCCCCAAAAACGCACAAAAAAGGCTCAAAGTTGTCTTAAGAAAGCACAGGCTGACGAGGTTGAGCCTTGTAGTGGACACGGTGCCAACAAGCCAAAGATTACTGAACCACATTTGGAGGACAACTCTGTTGAAGCTGTGCATGATCACTCCCCGCTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGGTGGACATAATAATATTGATAAGCTAATTGAGTCGAATCAAATGTGGGAGGGTTTTAATGAATTAGATGATGAGAGCCGTCCTTGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACAGATGGGCATTGTGAGGAAATCTCTTCTATGAACTCGTTGAAACGCCAAACTGGAAGAAAGTCAATGCTATCTGCAAGTATATCTGAGAGTGTTACTGCATTTTGA 867 0.4441 MNRLEENTIASCRWKKSLYPDRKGSFTVEEDERLIVAIHLFGRKWNQIARFVLGRTQAQCRDRYVNSLDPSLKWGGWTEEEDSRLKKAIAKYGFCWSKVAAYVPPRTDSQCRNFGSDQKMADPPSDPDAVNLPQKQKSMSSNASEKKRPQKRTKKAQSCLKKAQADEVEPCSGHGANKPKITEPHLEDNSVEAVHDHSPLDLVVTTTNGQGDLGGHNNIDKLIESNQMWEGFNELDDESRPCITPCENPEAGTTDGHCEEISSMNSLKRQTGRKSMLSASISESVTAF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0428 288 Gene3D - 17 74 - -
Lele42g0428 288 ProSiteProfiles Myb-like domain profile. 22 68 IPR001005 -
Lele42g0428 288 ProSiteProfiles SANT domain profile. 21 66 IPR017884 -
Lele42g0428 288 CDD SANT 77 114 IPR001005 -
Lele42g0428 288 Gene3D - 77 162 - -
Lele42g0428 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 113 IPR017930 -
Lele42g0428 288 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 12 178 - -
Lele42g0428 288 SUPERFAMILY Homeodomain-like 22 113 IPR009057 -
Lele42g0428 288 Pfam Myb-like DNA-binding domain 26 85 - -
Lele42g0428 288 SMART sant 73 121 IPR001005 -
Lele42g0428 288 SMART sant 22 70 IPR001005 -
Lele42g0428 288 ProSiteProfiles Myb-like domain profile. 69 113 IPR001005 -
Lele42g0428 288 CDD SANT 25 68 IPR001005 -
Lele42g0428 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 72 IPR017930 -
Lele42g0428 288 MobiDBLite consensus disorder prediction 107 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0428 Lele-ChrLele42 3911431 3913725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0428 4 113 MYB-Related Transcription Factor Family AT3G18100 36.752 1.51e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele42g0428 Myb_DNA-bind_6 2.1e-14 CL0123