Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0407 ATGAGCTCTAACTTGCAGAAACTCAAACATGGTAATACACAAGATGAAGAAGCAGATGAGAACGTACAGCCACATCAAAGCGCGACAATACCGTTGTCGCCGCCGCCTACGTGGGGGTTCTCGAAGCCGCCACGGCCGTCCCATGTGGAGGAGGAGGACAACAACGAGGAAGAGGAAGTTGTGTATGCAGAGAAAGCGAAAGTACAGATATTTGACTTGGAGTCTTCTTCTTCAGGCCGCAACTCCACGGCGGCGGTGGTGCCGCCATTCTCGTGGAGGAAGCTGTGGCTGTTCACGGGGCCGGGACTGCTAATGAGCGTGGCGTTTTTGGACCCTGGAAATTTGGAGGGTGATTTGCAGGCAGGAGCCATTGGAGGGTACTCATTGTTGTGGCTTTTGATGTGGACGACGATCATGGGCCTGTTGATACAGCTTTTGTCAGCGAGGCTCGGGGTAGCGACAGGGCGGCACTTGGCGGAGCTGTGCCGTGAGGAGTACACAAAGTGGGCGAGGTTGATACTGTATGTGATGGCGGAAATGGCATTGATAGCTGCAGATATTCAAGAGGTCATTGGAAGTGCCATAGCCATTAAGATTCTAAGTCATGGCATTTTGCCTATTTGGGCAGGAGTCGTAATCACAGCCCTTGATAGCTTTGTGTTTCTGTTTCTTGAGAACTATGGAGTGAGGAAGCTGGAAGGTGTATTCGCAATCTTCATTGGAACTATGGCCCTTTCTTTTGCTTGGATGTTCTTTGATACAAAGCCTAGCCCTAAACAACTTCTTATTGGTATTTTGGTGCCAAAAGTGAGCTCAAAAACCCTTCGTCAAGCTGTGGAACTTATAGGCTGCGTTATAACCCCACACAACGTATTCCTCCACTCAGCTCTAGTTCAATCCAGAAACATAGACATAAAAAACAAAGGCCAAGTCCAAGAGGCACTAAACTACTACACAATCGAGTCCACACTCGCACTTATCATCACCTTCTTCATCAACCTCTCCGTCATGACAGTCTTCGCTAGGGTTTTCTACAACACCGAACAAGCCGACGCCATCGGACTCGTAAACGCCGGCCAGTACCTGCAAGAGAAATACGGCGGAGGGTTCTTCCCTATATTATATATATGGGGAATGGGGTTGTTGGCTGCAGGACAAAGTAGTACGATTACTGGTACTTATGCTGGGCAGTTTATTACAGAAGGGTTTCTGAAACTTCGTTTGAAGAAATGGTTAAGAGCTTTGATCACTAGAAGTCTTGCCATTGTTCCTACGATGGTTGTGGCTCTTGTGTTTAATACTTCTGAAGGATCTTTAGATATTTTGAATGAGTGGCTCAATGTGGTTCAGTCTATTCAGATTCCTTTTGCTCTTATTCCTCTTCTTACTTTGGTTTCTAAAGAGGAAGTCATGGGCACTTTCAGAATTGGACCCCTTGTGGAGAAAGTGGCATGGACAGTGGCAGTGCTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTCCTCTCAGAAGTGAAGGGACTTGTGTTTGGTTTTGTGGTGTTCATTTGTGCAGCAGCTTGGTTATCATTCATTGCTTATTTGGTTAAACACAGTGGTGCCTTCTCTTCTTTCTTCCTCACTTCTCCTCATTCTCGTGGCTTCTCCTCTCTTCCTTCCAATTAA 1671 0.4674 MSSNLQKLKHGNTQDEEADENVQPHQSATIPLSPPPTWGFSKPPRPSHVEEEDNNEEEEVVYAEKAKVQIFDLESSSSGRNSTAAVVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCREEYTKWARLILYVMAEMALIAADIQEVIGSAIAIKILSHGILPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFIGTMALSFAWMFFDTKPSPKQLLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRNIDIKNKGQVQEALNYYTIESTLALIITFFINLSVMTVFARVFYNTEQADAIGLVNAGQYLQEKYGGGFFPILYIWGMGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMVVALVFNTSEGSLDILNEWLNVVQSIQIPFALIPLLTLVSKEEVMGTFRIGPLVEKVAWTVAVLVILVYGYMLLDFFLSEVKGLVFGFVVFICAAAWLSFIAYLVKHSGAFSSFFLTSPHSRGFSSLPSN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0407 556 Pfam Natural resistance-associated macrophage protein 116 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 MobiDBLite consensus disorder prediction 1 59 - -
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 413 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 385 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 174 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 447 466 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 204 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 278 301 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PRINTS Natural resistance-associated macrophage protein signature 229 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 Hamap Divalent metal cation transporter MntH [mntH]. 81 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 75 532 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele42g0407 556 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 93 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0407 Lele-ChrLele42 3638901 3646462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0407 54 534 Inorganic Solute Cotransporters AT1G47240 72.141 0.0 719