Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0405 ATGCCCACCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCCTTTTTTTCCTCTAAACCCTTTGTTTCTTCTTCTTCTTCCTCTCGCAGGAGCCTCCATGAACCCTTTCAGCCATTGGACAACCAGTCTCCTCCTCTTCCCCTTCCTCCTTCCCATCCTTCTTCTTCAGCTTCACCTCCTGAAACCCCCAAGTTACCATCTTCCACAAATACCCCTGACGCTCCTCCGTTTTTCCCTTCATATCCTGCTCCTCCTCCGCCTCCTCCTCCTCCTGTTGCTACCTTCATTTCTTACCCTGCCAACATTTCCTCTCTTGCCATCCCTCAAACTCCCAGACAGAAACCGAACTCTTCCCCTAAGCTTGTCGGGGTCAGTGTTGCTGCTATTCTCTCCGTCGTTGCCTTTGTTGGGGTTTCTGCCTTTGTCTATTGCCGGTGGCGAAGAAGGAGGCGGTTTACTGATGATGAGAAGGTTATAAGATCCGAGAGTAATCTCAGGTTGTTCTCTGACAATGTTGAAACCGGTAATACTAGTCGCAAGGTTAGGAATACGACTTCTTCTGCTAGCTCTGAGTTTCTTTATCTTGGTACTGTTGTTGATTCGCGCGGCATCGGTGACGATCGTGGCCGTTCTGATGCTCGAGGAAATGATAATGGCGGTGGCGGTGGTAGTCTGGACCCTAGCAGAATGGACTCGCCGGAGCTTCAACCGCTTCCACCGCTGGCCCGGCAAGCTTTGCTGCAGCAGAATGGAGCAGAGCGTTATGATATGCGTTCGACTACAACAGCAGACGGAGAAGACGAAGAGGAATTTTACTCGCCGAAAGGGTCTTTGGGCGGTCGGGATAGTTCAAGTGCTACCGGGTCGGGTTCTCGGAGAGTGTTCGTGGCTAATGCAGGTGAAAATATCGGCGGAGGAAGCAGTGGCTCGGGTTCTACTTCCTTTTCTTCTACCTCCGGTTCGCCCTACCGGTCACATTCCGCCAGTCTATCGCCGCCGGTTAGCTTAAGCCCCAAAAGGTCACAACCGAAATCACCGGAGGCTACGGTGGCTCAAATAAACCAGGTTGAATCACCTGCGTTATCTCCTGTTCACAATAATAATAATCAGTATGTGCAATCTTCTTCTATGCCAATGCCATCGTCGCCTTCAACACCAGAGAAAGCTTTTGCTTGTGATGACCAACCTCCTTTGCTGTCTCCACTCTCGTTATCGCCAAATAGAGCTTTGCAGAAGAATTCTAATTTGTCATCACCGAGATTATCTAATGCAGTTTCCGAGGGAGTGGAGAAAAATGGAGGCGCTTCTCCAAGATTATCTAATGCTTCATATCAAAGTACGAAGACTGTGTCTTCATCTACGGCTTTCTCTCTTCCATCATCGCCGGAGAAAGCATGGGAGCGAAGTTTTGACCAGTCTCCTAGAATTTCCAGCTTTTCTGATCGGTATAGGCATTCTCCTCTGTCTCTGTCATCGCGGCCATTATCTCCAACCTTGCTTTCATCACCAGAAACGGAATTGTGCAAAATTCCAGTTCAAGATTTCACCCCACATAAACGATGGCAGATTCCGATTCTCTCAACAACACCCGTTGCTCAGCCTCCTTTGGTTTCAGCTCCGCCTCCTCCTCCGCCACCACCGTCACGAGAACATAGTCGGAAAAAATGGGAAATGCCATCTCTTTCAACAGCCACTGATCAGCCCATTTCTAGGCCACCTGATCTAATACCTCCTTCAAGACCTTTTGTGTTGCAAAACCCAACAATGAAGACTTCATCTGCTGAGTTGCCGCGAAGTTCTCGAAATTCAGGGGAAATCAATGAAGCCCAGAAGCCGAAGTTGAAGCCTCTGCATTGGGATAAAGTGCGATCGAGCTCTGATCGCGAAATGGTGTGGGATCACTTGAGGACAAGTTCTTTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTGAACGCGCCTAAGAATTCTACTCCACGCCTGGGTCTTTCCCAGCAAAGTGAAGAGGATAGAATACTTGATCCTAAAAGGTCACAAAATATTTCGATTTTACTAAGAGCGCTTAATGTAACTATAGAAGAAGTTTGTGAAGCTCTTGTAGAAGGTAGTGCTGATACACTTGGATCAGAACTACTTGAAAGCTTGTTAAAGATGGCGCCAAGCAAGGAAGAAGAGTGGAAATTGAGGGAACACAAAGATGACTCGCCAACAAAGCTTGGTCATGCTGAGAAATTTCTGAAGGCTATGCTTGATATACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTGTACATTGCTAACTTCGAATCTGAGGTTGAGTATCTCAGGAAATCGTTCGGAATTCTGGAGGCTGCATGTGAAGAGCTGAAAAACAGTAGGATGTTCTTGAAACTTCTTGAGGCTGTGCTTAAAACCGGGAACCGTATGAATGTGGGGACGAACCGAGGTGATGCGCGTGCCTTCAAGCTTGATACACTTCTCAAGCTTGTTGATGTCAAAGGTGCAGATGGAAAAACCAGCCTCCTGCATTTTGTTGTGCAGGAAATTATAAGAATCGAAGGCGCTCGTCTCTCAGGTACCAATCAAACTCCTAACCCTAGCTCCATTGAAGATGCCAAGTGCAGGAAACTTGGACTGCAAGTAGTAGCCTGTCTGGGTTCAGAGCTAGCAAATGTAAAGAAGGCTGCTGCTATGGATTCCGATGTTCTCATCGGTGAAGTCTCAAAACTTTCTCAAGGACTAAAGAATGTCGCCGGCATCTTGCAACTAACCGAAACCACCGAGTCGGGTGAAGCCTCTTCCCGGATTACATGCGAAGGACACAATGCAATAATTTCTTCAGATGATGACAGTTCATCTCCATTGTGA 2868 0.4711 MPTFFFFFFFFLSFFSSKPFVSSSSSSRRSLHEPFQPLDNQSPPLPLPPSHPSSSASPPETPKLPSSTNTPDAPPFFPSYPAPPPPPPPPVATFISYPANISSLAIPQTPRQKPNSSPKLVGVSVAAILSVVAFVGVSAFVYCRWRRRRRFTDDEKVIRSESNLRLFSDNVETGNTSRKVRNTTSSASSEFLYLGTVVDSRGIGDDRGRSDARGNDNGGGGGSLDPSRMDSPELQPLPPLARQALLQQNGAERYDMRSTTTADGEDEEEFYSPKGSLGGRDSSSATGSGSRRVFVANAGENIGGGSSGSGSTSFSSTSGSPYRSHSASLSPPVSLSPKRSQPKSPEATVAQINQVESPALSPVHNNNNQYVQSSSMPMPSSPSTPEKAFACDDQPPLLSPLSLSPNRALQKNSNLSSPRLSNAVSEGVEKNGGASPRLSNASYQSTKTVSSSTAFSLPSSPEKAWERSFDQSPRISSFSDRYRHSPLSLSSRPLSPTLLSSPETELCKIPVQDFTPHKRWQIPILSTTPVAQPPLVSAPPPPPPPPSREHSRKKWEMPSLSTATDQPISRPPDLIPPSRPFVLQNPTMKTSSAELPRSSRNSGEINEAQKPKLKPLHWDKVRSSSDREMVWDHLRTSSFKLNEEMIETLFVNAPKNSTPRLGLSQQSEEDRILDPKRSQNISILLRALNVTIEEVCEALVEGSADTLGSELLESLLKMAPSKEEEWKLREHKDDSPTKLGHAEKFLKAMLDIPFAFKRVEAMLYIANFESEVEYLRKSFGILEAACEELKNSRMFLKLLEAVLKTGNRMNVGTNRGDARAFKLDTLLKLVDVKGADGKTSLLHFVVQEIIRIEGARLSGTNQTPNPSSIEDAKCRKLGLQVVACLGSELANVKKAAAMDSDVLIGEVSKLSQGLKNVAGILQLTETTESGEASSRITCEGHNAIISSDDDSSSPL 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0405 955 MobiDBLite consensus disorder prediction 202 236 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 530 610 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 249 445 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 39 82 - -
Lele42g0405 955 Gene3D Formin, FH2 domain 604 945 IPR042201 -
Lele42g0405 955 SUPERFAMILY Formin homology 2 domain (FH2 domain) 539 925 - -
Lele42g0405 955 ProSiteProfiles Formin homology-2 (FH2) domain profile. 603 955 IPR015425 -
Lele42g0405 955 MobiDBLite consensus disorder prediction 302 382 - -
Lele42g0405 955 SMART it6_source 603 955 IPR015425 -
Lele42g0405 955 MobiDBLite consensus disorder prediction 29 82 - -
Lele42g0405 955 PANTHER FORMIN-RELATED 417 930 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele42g0405 955 MobiDBLite consensus disorder prediction 451 470 - -
Lele42g0405 955 Pfam Formin Homology 2 Domain 608 929 IPR015425 -
Lele42g0405 955 MobiDBLite consensus disorder prediction 258 274 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 476 500 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 583 606 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 277 291 - -
Lele42g0405 955 MobiDBLite consensus disorder prediction 399 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0405 Lele-ChrLele42 3584944 3588808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0405 555 937 FH2 protein (formin) Gene Family AT3G25500 69.133 1.03e-170 524