Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0399 ATGGTTCTGAGTAGCCGATTTTTCAGAGATCATTTCGTTATTAATGTCTTGCTGCTGCTTGGTATTAGCATCACCAATGGGACTGAAACTGATATTTTCTGCTTGAAAAACATACAACATTCACTTGAAGATCCTTATAATTATTTGAAGTCTTCCTGGAATTTCAATAATGGAACAGAAGGCTTTATCTGTCACTTTACTGGGGTTGAGTGTTGGCATGATGATGAGAACAGAGTCTTAAACCTCAAGCTGTCAAATATGGGACTCAAGGGTCAATTTCCTCGTGCCATACAAAATTGCTCAAGCTTAACTGGATTGGATCTTTCGATCAACAAACTTTCTGGAACCATTCCAGCAGATATTCAAACACTTCTTAAATTTGTGGTAACCCTGGACCTCTCATCAAATGACTTTTCAGGAGAGATCCCTCTGGGCCTCGCAAATTGTTCCTATCTTAATACCCTTAAACTTGATGAAAATCAACTAACTGGTCAAATTCCTCCACAACTTGCCCAGCTTGAACGGCTTAAGACTTTTACTGTCACAAATAATCTTTTGATGGGGCCAGTCCCACCTTTTAGAAGCAATGGTGGTATTACAGCAGATAGTTATTCAAATAATTCAGGACTTTGTGGGGCCCCCTTGGAGACATGCCGGGGGAAGAAGATTAACACTGCAGTTATAGCTGGTGCAGCTGTCGGTGGGGTAACTGTTGCAGCATTAGCATTGGGTGTGGTGGCATTCTTCTTTGTCCGCCGAGTCTCTGCAAAGAAGGAAGAGGATCCTGAAGGAAATAAATGGGCAAGAAGTCTAAAGGGAACGAAAGGAATAAAGGTTTCTATGTTTGAAAAGTCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCGACTAACAACTTCAGTAAAAGCAATATCATTGGTTCAGGAAGAACAGGGACCATGTACAAAGCTGTCCTTGATGATGGCGGCACAATGCTCATGGTTAAAAGGTTGCAGGAATCTCAGTACTCAGAAAAGGAATTTGCCTCTGAGATGGCTACATTGGGGAATGTTAGAAATCGTAACTTGGTTTCCCTTTTAGGTTTTTGTGTGGCCAAACAGGAGAGGCTTTTGGTGTATAAATATATGGAAAATGGAAGTCTTCATGATCAGCTACATCCTGATACTGGTGGGGGCACCATGGAGTGGTCTTTAAGGCTAAAAATTGCAATTGGGGCAGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGTATTATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAATCCAATTGATACACATTTGAGTACTTTTGTAAATGGTGAGTTTGGAGATCTTGGTTATGTTGCTCCTGAATATACAAGAACTCTGGTGGCCACGCCGAAGGGAGATATCTATAGCTTTGGTACTGTGCTTTTAGAGTTGGTGACAGGTGAGAGGCCTACCCATGTGGCTAAAGCTCCTGAAACTTTCAAAGGAAATTTGGTGGAGTGGATTTCAACGCTCTCAAGCAAATCTGAACTCCAGAATGCTATTGATGAATCATTACTTGGAAAGGGTGTTGATGGGGAGATTTTCCAATTTCTCAAGGTTGCATGCAACTGTGTCTCACCAAATCCAAAGGAAAGGCCCACTATGTTTGAAGTGTACCAACTTCTTAGAGCAATTAGGAGCAGATACAATTTCACAGCTGATGATGAGATATTGGTACCTACAGATACCGGCGATGCTGCCAATTTTGAGGAACTTATTGTCGCACGAGAAGAAAATAGTTGA 1845 0.4136 MVLSSRFFRDHFVINVLLLLGISITNGTETDIFCLKNIQHSLEDPYNYLKSSWNFNNGTEGFICHFTGVECWHDDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPADIQTLLKFVVTLDLSSNDFSGEIPLGLANCSYLNTLKLDENQLTGQIPPQLAQLERLKTFTVTNNLLMGPVPPFRSNGGITADSYSNNSGLCGAPLETCRGKKINTAVIAGAAVGGVTVAALALGVVAFFFVRRVSAKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIGSGRTGTMYKAVLDDGGTMLMVKRLQESQYSEKEFASEMATLGNVRNRNLVSLLGFCVAKQERLLVYKYMENGSLHDQLHPDTGGGTMEWSLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWISTLSSKSELQNAIDESLLGKGVDGEIFQFLKVACNCVSPNPKERPTMFEVYQLLRAIRSRYNFTADDEILVPTDTGDAANFEELIVAREENS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0399 614 SUPERFAMILY L domain-like 29 194 - -
Lele42g0399 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 52 193 - -
Lele42g0399 614 Gene3D Transferase(Phosphotransferase) domain 1 377 595 - -
Lele42g0399 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 376 - -
Lele42g0399 614 ProSiteProfiles Protein kinase domain profile. 301 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0399 614 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 377 590 - -
Lele42g0399 614 FunFam Nuclear pore complex protein NUP107 28 192 - -
Lele42g0399 614 Gene3D Ribonuclease Inhibitor 29 220 IPR032675 -
Lele42g0399 614 Pfam Protein kinase domain 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0399 614 Gene3D Phosphorylase Kinase; domain 1 262 376 - -
Lele42g0399 614 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Lele42g0399 614 CDD STKc_IRAK 307 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0399 Lele-ChrLele42 3489716 3491933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0399 16 590 Receptor kinase-like Gene Family AT3G28450 48.116 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele42g0399 Pkinase 1.7e-38 CL0016