Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0389 ATGTGGTGTGCACTTTGGAATTTGATGTTCAATTTGGATTTAGATGCTGAGGTAGAAACTGTTCAAAGTTCTGCTGAGAAAATATCAGCAACATGTGAAGACAGATCCATTTCAGAACCTTATGTTGGTATGAAGTTTGATTCTGAAGAGGCTGCCAGGGAATTTTACAGTGCATACGCTAGACAGGAAGGGTTTGTCGTCCGTCTTGATCGTTGCCATCGTTCTGAGGCTGATAATAGGATCCTTTCTCGTCGTTTTTCATGCAATAAGCAAGGCTTTTATGTGAGACCTAGAAATGAGACAAGACCGGTTCGGAGACCACGAGTTAGCATAAGAGAAGGCTGTGAGGCTATGATGTTGGTTAAAGTAAACAATGATGGGAAATGGGTTGTTACTAAATTTGTGAAGGAACATTGTCACCCTCTACAAGTTTCTGCCTATCTTACCGATAGAAGAACTTTGGAATCAAAGGATTTTAAGATTCAACTACTCACGAGGGAGCTTCAGCGTCATGACAAATTATGTCAACTATATCGTGGGCTGTTACTTTCCCTACTCGAATCCGTCGAGGAGCAAACTGAAGTTTTATCAGGAAAACTCGAATTTGTCGCCAGCAGTTTAAAACAGGTTGAGAATTATGTTGAAAAACCTTTGGACACTCAGTAG 666 0.4084 MWCALWNLMFNLDLDAEVETVQSSAEKISATCEDRSISEPYVGMKFDSEEAAREFYSAYARQEGFVVRLDRCHRSEADNRILSRRFSCNKQGFYVRPRNETRPVRRPRVSIREGCEAMMLVKVNNDGKWVVTKFVKEHCHPLQVSAYLTDRRTLESKDFKIQLLTRELQRHDKLCQLYRGLLLSLLESVEEQTEVLSGKLEFVASSLKQVENYVEKPLDTQ 221
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0389 221 Pfam FAR1 DNA-binding domain 54 143 IPR004330 -
Lele42g0389 221 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 201 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele42g0389 Lele-ChrLele42 3408196 3410844 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele42g0389 FAR1 5.4e-27 CL0274