Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0358 ATGAGTTATTGGTCACCAGCATCTGTTTTTACTAATCAACTTATACCACTGTCTGCTGGAAGCATCGAATCTTACGTTAATATCAAAAGCAGCACCAGTTTTATATGTAGTCCAAGCCAAGGAAGGTGCTATCTCTCTGTTTCTGAGAACCATTATAAAGTCAGGAGACTCAGGATTTCTGGGGTAATTAAAGCTAGACAAGGATTGACACAGTTTCAGGCGCAACAAGGAAGTTGGGAAGAACCTGATGATGGAAGCGATAGTGAGTATGATGAAGAAGAAGACGAGGAAATGGAAGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAAGAGATAACATCATCAGCTGTTAATGGTGTTATTTCAGTTTACAAGCATGGGGAGGATATTAAAAAAGGCACTTCTTCTATTCCTATGTTCTTCATTTTTTTCGTTTTTAAACCTTATCTCTTTTGCTAGGTTGAACAGCTTTTGGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTGGAAAAAATTTCAACTGAAAAATGGAGCCCACTGCACACTTTAGCGCTATCAACACAGATAAAATGTATGGATCAGCTGCTTGAAAGTGGTGTTGATATTGATCTTAAGAACAAGGAAGGTCTCACCGCACTTCATATAGATATCATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACAGAAAGTTGAAGTTGGTGCCAAGCAAACTGTAAAGTTATTGATCAAATATAAGGTTGACGTCAACGTTGCAGATAATGAAGGTTGGACCACATTGCATGTTGCTATTCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAATGGTGCGGACAAGACAAGAAGAAATAAGAACCCAATTAAGACGTCTTCGTCTGAAACTTCACGGAAATCCTCTTTAGGTTTTGTTCTTTGCTTCTGTTTTTCTCCTCGAACCTTCGTTACAGTCTTGTGTGTGTTTCCTAAATTCTCGCGTCCCCAGATGGATGAGGATTTCGATATGCCCCCGCCGGAGGAGATGAATGAGGACTTCGATCTCCCCGGTGATGCCTCCACTCTTAAGGTTGGAGAGGAGAAGGAGATCGGCACGCAGGGCTTGAAGAAGAAGCTCCTCAAAGAAGGTGAAGGCTGGGACACACCTGAAGTGGGCGATGAAGTTGAAGTTCATTACACGGGAACTTTGCTCGATGGGACTAAGTTTGATTCGAGCCGCGACAGAGGAACCCCCTTTAAGTTTACGCTCGGACAAGGGCAAGTCATTAAAGGGTGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTCCTGAACTAGCATATGGTGAATCTGGTTCTCCTCCAACCATTCCTCCTAATGCTACTCTTCAATTTGATGTTGAGCTCGTGTCTTGGACCAGTGTGAAGGACATATCCAAGGATGGTGGCATATTTAAGAAAATACTTACTGAAGGAGAGAAGTGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGTTCGGCTTGAGGATGGAACACTTGTATCAAAATCTGATGGAGTGGAGTTTACAGTGAGAGAGGGTTACTTTTGTCCTGCGTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTAACTGTGATGCCACAATATGGTTTTGGTGAGAAGGGTAAAGTAGCACACGGTGATGAAGGTGCAGTTCCACCAAATGCATCATTGCAGATAACTCTTGAATTGGTTTCTTGGAAGACTGTTTCAGAAGTAACTGATGATAAGAAGGTCATCAAGAAAATCCTCAATGAAGGGGAAGGATACGAGCGTCCAAATGAAGGAGCTGTTGTGCAAGTGAAATTGATTGGAAAACTGCAAGATGGCACTGTTTTCTTGAAGAGGGGCCATGATGAAGAGCTGTTTGAATTCAAAACAGATGAAGAGCAAGTCATTGATGGACTTGATAGAGCAGTGTTGACTATGAAAAAGGGTGAAGTAGCATTATTGACTGTTGCACCTGAGTACGCCTTTGGTTCATCCGAGTCCAAGCAAGAATTGGCTGTTGTTCCTCTCAACTCAACTGTTTACTATGAAGTCGAGCTAGTATCATTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACAGAGGAGAAGATTGAAGGTGCTGCTAAGAAGAAAGAAGAAGGAAATGCCTTGTTTAAGAGTGGAAAATATGCTAAAGCTTCTAAAAGATATGAGAAGGCTGTCAACTATATAGAGTACGATTCCTCCTTCAGTGAAGAGGAGAAGAAGCAGGCCAAGGCACTGAAGATTGCTTGCAATCTCAACAATGCGGCTTGCAAGTTGAAGTTGAAAAATTATAAAGAAGCTGAGAGATTGTGTACTAAGGTTTTGGATCTTGAAAGCACAAACGTAAAGGCACTTTATAGAAGAGCACAGGCATGTATCGAGTTGGCTGACTTGGATTTGGCGGAAGTTGATATTAAGAAAGCTCTCGAGATAGACCCTAACAACAGGGATTTGAAGTTGGAGTACAGGACTTTGAAGGAAAAGGTGAAGGAGTTTAACAGAAAGGAGGCTAGATTTTATGGAAACATGTTTGCCAAGATGACTAAGCCGGATCCAAATGAAAATAATAAAGCAGCGAACAAGGATGCTGAACCCATGAGCATTGACAGCAAAGTATAA 2727 0.4144 MSYWSPASVFTNQLIPLSAGSIESYVNIKSSTSFICSPSQGRCYLSVSENHYKVRRLRISGVIKARQGLTQFQAQQGSWEEPDDGSDSEYDEEEDEEMEDENYGFESDWEEEEITSSAVNGVISVYKHGEDIKKGTSSIPMFFIFFVFKPYLFCXVEQLLEPEERAVLQQNVTPNLEKISTEKWSPLHTLALSTQIKCMDQLLESGVDIDLKNKEGLTALHIDIIGKKEAVISHLLQKVEVGAKQTVKLLIKYKVDVNVADNEGWTTLHVAIQSRNRDIAKILLVNGADKTRRNKNPIKTSSSETSRKSSLGFVLCFCFSPRTFVTVLCVFPKFSRPQMDEDFDMPPPEEMNEDFDLPGDASTLKVGEEKEIGTQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELVSWTSVKDISKDGGIFKKILTEGEKWENPKDPDEVLVKYEVRLEDGTLVSKSDGVEFTVREGYFCPAFAKAVKTMKKGEKVLLTVMPQYGFGEKGKVAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILNEGEGYERPNEGAVVQVKLIGKLQDGTVFLKRGHDEELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTVAPEYAFGSSESKQELAVVPLNSTVYYEVELVSFVKEKESWDMNTEEKIEGAAKKKEEGNALFKSGKYAKASKRYEKAVNYIEYDSSFSEEEKKQAKALKIACNLNNAACKLKLKNYKEAERLCTKVLDLESTNVKALYRRAQACIELADLDLAEVDIKKALEIDPNNRDLKLEYRTLKEKVKEFNRKEARFYGNMFAKMTKPDPNENNKAANKDAEPMSIDSKV 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0358 908 ProSiteProfiles Ankyrin repeat profile. 263 295 IPR002110 GO:0005515
Lele42g0358 908 Coils Coil 851 871 - -
Lele42g0358 908 Gene3D - 600 720 IPR046357 GO:0003755
Lele42g0358 908 Pfam Tetratricopeptide repeat 819 851 IPR019734 GO:0005515
Lele42g0358 908 MobiDBLite consensus disorder prediction 881 908 - -
Lele42g0358 908 Gene3D - 485 599 IPR046357 GO:0003755
Lele42g0358 908 Gene3D Tetratricopeptide repeat domain 721 878 IPR011990 GO:0005515
Lele42g0358 908 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 627 718 IPR001179 GO:0003755
Lele42g0358 908 MobiDBLite consensus disorder prediction 82 109 - -
Lele42g0358 908 PANTHER PEPTIDYLPROLYL ISOMERASE 346 484 - -
Lele42g0358 908 SUPERFAMILY TPR-like 723 883 IPR011990 GO:0005515
Lele42g0358 908 SUPERFAMILY FKBP-like 372 487 - -
Lele42g0358 908 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 510 599 IPR001179 GO:0003755
Lele42g0358 908 SUPERFAMILY Ankyrin repeat 174 296 IPR036770 -
Lele42g0358 908 SUPERFAMILY FKBP-like 486 602 - -
Lele42g0358 908 Gene3D - 153 242 IPR036770 -
Lele42g0358 908 SMART tpr_5 818 851 IPR019734 GO:0005515
Lele42g0358 908 SMART tpr_5 735 768 IPR019734 GO:0005515
Lele42g0358 908 SMART tpr_5 784 817 IPR019734 GO:0005515
Lele42g0358 908 ProSiteProfiles Ankyrin repeat region circular profile. 263 289 - -
Lele42g0358 908 SUPERFAMILY FKBP-like 604 737 - -
Lele42g0358 908 MobiDBLite consensus disorder prediction 74 109 - -
Lele42g0358 908 Pfam Ankyrin repeats (3 copies) 243 294 IPR002110 GO:0005515
Lele42g0358 908 ProSiteProfiles Ankyrin repeat profile. 182 214 IPR002110 GO:0005515
Lele42g0358 908 FunFam Peptidylprolyl isomerase 600 720 - -
Lele42g0358 908 Gene3D - 370 484 IPR046357 GO:0003755
Lele42g0358 908 FunFam Peptidylprolyl isomerase 486 599 - -
Lele42g0358 908 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 394 482 IPR001179 GO:0003755
Lele42g0358 908 MobiDBLite consensus disorder prediction 340 361 - -
Lele42g0358 908 ProSiteProfiles TPR repeat profile. 818 851 IPR019734 GO:0005515
Lele42g0358 908 Gene3D - 243 309 IPR036770 -
Lele42g0358 908 SMART ANK_2a 215 259 IPR002110 GO:0005515
Lele42g0358 908 SMART ANK_2a 182 211 IPR002110 GO:0005515
Lele42g0358 908 SMART ANK_2a 263 292 IPR002110 GO:0005515
Lele42g0358 908 FunFam Peptidylprolyl isomerase 367 485 - -
Lele42g0358 908 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 505 595 IPR001179 GO:0003755
Lele42g0358 908 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 621 715 IPR001179 GO:0003755
Lele42g0358 908 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 390 479 IPR001179 GO:0003755
Lele42g0358 908 FunFam Peptidylprolyl isomerase 723 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0358 Lele-ChrLele42 3074742 3085237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0358 339 883 Calmodulin-binding Proteins AT3G25230 80.146 0.0 879
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0358 42 3074742 3085237 Lele43g1002 43 18555317 18569855 hybridization