Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0347 ATGGCCACCAATTTTTGGACATCATCTCATTATAAGCAGCTTGTAGAACAAGAGGATGTGGATATGTTGAACCCACTTGACAAGGAAAAGGGTATCACACTTGAGGATTTTAAGCTCATAAAGATGCAAATGTCTAATTATATCTCAAAATTGGCTCAAAATGTTAAAGTTAGGCAGAGGGTTGTTGCTACTGCAGTTACATACATGAGGCGTGTTTACACCAGAAAGAGTATGGCTGAGTATGATCCACGTCTGGTGGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTAGGTTGCTTGTATTTTACATTAAAAAATTATATTCTGATGACAAGTACAGATTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAGGCACTTAACTATTACCTGGTTGTTTTCCACCCTTATCGTTCGTTGTCTGAGTTGCTCCAGGATGCCGGGTTGAATGATATCAACATGACTCAATTAACATGGGGACTAGTAAATGACACCTACAAGATGGACCTAATTCTTGTGCATCCTCCTCATCTGATTGCTTTAGCATGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACTACGGCTTGGTTTGAAGAGCTTCGTGTCGATATGAATGTTGTAAAAAATATATCAATGGAGATTCTTGATTTCTATGAAAGCAATCGAATGTACACAGACGAGAGGATCAATGCTGCTCTTAACAAGCTAGGCTCCAGGTCTTAA 762 0.3976 MATNFWTSSHYKQLVEQEDVDMLNPLDKEKGITLEDFKLIKMQMSNYISKLAQNVKVRQRVVATAVTYMRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSELLQDAGLNDINMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMYTDERINAALNKLGSRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0347 253 CDD CYCLIN 46 135 IPR013763 -
Lele42g0347 253 PIRSF Cyclin_C_H_G 1 252 - -
Lele42g0347 253 PANTHER CYCLIN 25 234 IPR043198 GO:0006357|GO:0016538
Lele42g0347 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Lele42g0347 253 CDD CYCLIN 146 213 IPR013763 -
Lele42g0347 253 Gene3D - 19 143 - -
Lele42g0347 253 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Lele42g0347 253 SMART cyclin_7 46 136 IPR013763 -
Lele42g0347 253 SMART cyclin_7 149 229 IPR013763 -
Lele42g0347 253 Gene3D - 7 240 - -
Lele42g0347 253 SUPERFAMILY Cyclin-like 146 238 IPR036915 -
Lele42g0347 253 Pfam Cyclin, N-terminal domain 41 142 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0347 Lele-ChrLele42 2984500 2991798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0347 59 199 Core Cell Cycle Gene Families AT5G27620 30.464 2.26e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0347 42 2984500 2991798 Lele43g1015 43 18696907 18707542 hybridization
Lele42g0347 42 2984500 2991798 Lele44g0995 44 18713271 18718591 hybridization