Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0332 ATGGTGAGAGAGCAGAGGGTAGAGTCCTTCTACACCAGACTACGTGAGTCGGCAATTGCTTCGCCTTCTTCGCCCTTACTCATATTCCCGTCAACGTCAGATGCCGACTCGCTCTGCGCATTGAAAATCATCTTCCACGTTCTCGAATCTGATTCGATCCGATATGCATGTTATCCTGTGTCTTCGTTTCAGGAGATTAACAAATACGCAGGGGCCAGTTTAAATTCTCCCGACGAGCCCGTTTCAATCCTGTTGATAAATTGGGGGTGCCACAGGGACTTGAGGAGGATTTTGAATCTGGGTCCTTCCGCACATATTTTCGTGGTTGATAGTCACCGTCCAATTCATCTTCACAATTTGAGCGATGATAATGATCGTGTGGTCGTGCTATATACACGAGATGATGAGCAGCAGGCTGATTTGGCCTATGATTTTGATGTGTCGGCTTTGGCTAATGCCACGGACTTAAATAGTGACTATGAGGAGGCTGAAGAGGAATTTGACAGTGATGACGACAATGACAGTGAAAGTGAAGATGAGGGGAATAGGGATGGATCCAGGAAGCGAAGGCGAGTTTCTCCGGATAATGAACAAGACCCAATTCAGCTTTTTCGAAAGCTGAAAAAGGAATATTATCATATGGGTACATTTCATGGGAAGCCATCTGGGTGCCTGATGTATGAATTATGCCATTTTCTGCGGAGGAACACAAATGAACTGCTGTGGCTCGCTTGTGTATCTTTAACGGATCAGTTTATTCATGAAAGGCTAAGTGACGAACGATACAAAGATGGGGTTATGGAGCTAGAGCAGCACATCAACTCTTCGGGGAATTTGGATGCGGTAACTTGTGTAACACTGAAGGATGGGACAAAGATCCGGGCGCCTAATGCAACTAGAATCACATACGAAGAGGAACCAAGGCTTATGTTGCTAAAAGAGTGGAATCTGTTTGATTCAATGTTGTGTTCTTCTTACATTGCGACTAAATTGAAGACATGGAGCGACAATGGGATGAAAAAGCTGAATCTTCTGCTAGCCCGGATGGGGTTTGCTCTTGCTGATTGCCGACAGAAGTTTCAATACATGAACATAGAAGTCAAACGCAAAATGAAAGATGAATTTGAGCGATTTCTGCCTGAGTATGGGCTGACTGATTTCTATTATCGGAGTTTCTTAAGAATACATGGTTATAATTCTAGGGTGTCTGCGGCAGACGTGGTATATGGTGTGACTGCTCTGCTTGAATCATTTGTGAAATCAGATGGCTCATGTGCTTCCAAGCAATTTGGTGTAGCTTATGATGCACTGTCCCTGAGCAATCTTGATAAGCTAAAATCTGGAATGCAGCATGCAATCAAGATTCAAAGGGCCATTCTAAGACAAGGAAGCACAGCGATAACCAAGAGTGGCTGTATAAGAAGTGGAAGGAAATTCAGATGGGTAAAACTTGAAGATTCTGCTGACACAAAGTTACTGGGTTATCCCCAAGCTTTGACTAAATTCTGTTATTTTCTTATGGACGCTTTGCGAGAGAAAGGGGCAAGAATGAAGCCTCTGCTTTGTGCTTGCTTATCTCAAGAACCCAGTAAAATGTTGATTGTAGGTGTTTGTGGGAAGCCTCGTCTCGGTGCAGGTAAAGGAAATGCATTTGGAATTGCATTTAGAAATGCTGCTGAGGAGATTGGAGCAGACTTCTTTCATGAATTGTTTGAATCTTCATGGATCGTTTTAAATGCATCAGCAGTCAATTCCTTCATGGTTAGGTTGACAGAGAGGCTATGA 1785 0.4353 MVREQRVESFYTRLRESAIASPSSPLLIFPSTSDADSLCALKIIFHVLESDSIRYACYPVSSFQEINKYAGASLNSPDEPVSILLINWGCHRDLRRILNLGPSAHIFVVDSHRPIHLHNLSDDNDRVVVLYTRDDEQQADLAYDFDVSALANATDLNSDYEEAEEEFDSDDDNDSESEDEGNRDGSRKRRRVSPDNEQDPIQLFRKLKKEYYHMGTFHGKPSGCLMYELCHFLRRNTNELLWLACVSLTDQFIHERLSDERYKDGVMELEQHINSSGNLDAVTCVTLKDGTKIRAPNATRITYEEEPRLMLLKEWNLFDSMLCSSYIATKLKTWSDNGMKKLNLLLARMGFALADCRQKFQYMNIEVKRKMKDEFERFLPEYGLTDFYYRSFLRIHGYNSRVSAADVVYGVTALLESFVKSDGSCASKQFGVAYDALSLSNLDKLKSGMQHAIKIQRAILRQGSTAITKSGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPSKMLIVGVCGKPRLGAGKGNAFGIAFRNAAEEIGADFFHELFESSWIVLNASAVNSFMVRLTERL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0332 594 Coils Coil 153 173 - -
Lele42g0332 594 MobiDBLite consensus disorder prediction 180 199 - -
Lele42g0332 594 MobiDBLite consensus disorder prediction 159 199 - -
Lele42g0332 594 PANTHER CDC45-RELATED PROTEIN 1 593 IPR003874 GO:0006270
Lele42g0332 594 Pfam CDC45-like protein 422 592 IPR003874 GO:0006270
Lele42g0332 594 Pfam CDC45-like protein 27 417 IPR003874 GO:0006270
Lele42g0332 594 MobiDBLite consensus disorder prediction 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0332 Lele-ChrLele42 2850813 2852597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0332 1 594 Core DNA Replication Machinery Family AT3G25100 73.964 0.0 905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0332 42 2850813 2852597 Lele43g1033 43 18869520 18871304 hybridization
Lele42g0332 42 2850813 2852597 Lele44g1014 44 18868007 18869791 hybridization