Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0309 ATGCGGTGCGACTGCGAAGAGGATGGCGTGGGTGCGAAATTGCGACTAAGCCCATCTTCTCACTGTTCCCATCCAATTCACTCTACTCAACCCGACTCCGCCATCTCCATCACCGCCGCAATCACCACAGCCGAATGTCGACCAAACCCAAACCCTTCTTCTTCAATTAGATTAAACCACCATGACATAAACAAATCCCAAGAAAAGCAGGGCAAAAAGAGGCCAACGTGGAAGAAAAGCCCATCAATGGCCTCACCTCCCTCACCTAAACCCTTCTCCACAGTCACCACCACCGCCTCGCCCACCAAGAAGCCCCAATCAATTCCGTGGACCCATGAAGAAACAATCCATCTCATCCAAGCCTACCAAGAGAAATGGTATTCCCTCAAGCGAGGTCCTCTCAAGGCCAACCAATGGGAAGAGGTCGCCGTCACCATCGCCGTCCGATGCGGCTATGACTACAATGGGCCTTCCAAGACCGCCGTCCAGTGCCGCCACAAGATGGAAAAACTCCGTCAACGTTATCGTGCCGAGAACCACCGTCTCGCTGCTTCCTCCAGTGGCAGTAGTCGCGTTTGGCAATACTTTGACCTCATGGACCGATTAGAGAAAGGCCCTATGCCTATTTCTGCTCGGCCCCTTGTGGCTTTCACGCCCTTTGATTATGATGATAACGAAGAGGAAAATGACGATAATGTTGGTGGTGATGATGATAAAGATAATGAGATTGATGAAAGACGGCAATATAGTCAGTCAAGGAGTACTAATTATTTTCCCAGACAGCGACCTGAAAGTAAATATAGAGGAGTTTCTGAGTTTCCTCGAGAGAAACTAGCTAAGAGGCTATGGAGGGTCTCTGAAGACGAAGAAGAGGAAGAGGTGGAAGAGTATGTTGAGGTAAATGGTGAGAGAAGGGTTAAAGGAATGGGGTTGGTTTCTGGGTTAGCTACAGAGATGAAGGCTTTTGCGGAAAGATTCATTGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACTGAAAGGTGTAGGTTGGAGATGGAGAATAAACGGATTGAGATGATTGTAAAATCGCAGCAGAGAATTGTTGATTCAATTGGGGAGGCTTTTGGTTTCCCTAAGAAGATGAAGATAAGTCCTGGAATCTAA 1149 0.4778 MRCDCEEDGVGAKLRLSPSSHCSHPIHSTQPDSAISITAAITTAECRPNPNPSSSIRLNHHDINKSQEKQGKKRPTWKKSPSMASPPSPKPFSTVTTTASPTKKPQSIPWTHEETIHLIQAYQEKWYSLKRGPLKANQWEEVAVTIAVRCGYDYNGPSKTAVQCRHKMEKLRQRYRAENHRLAASSSGSSRVWQYFDLMDRLEKGPMPISARPLVAFTPFDYDDNEEENDDNVGGDDDKDNEIDERRQYSQSRSTNYFPRQRPESKYRGVSEFPREKLAKRLWRVSEDEEEEEVEEYVEVNGERRVKGMGLVSGLATEMKAFAERFIGMENLKMEMMKETERCRLEMENKRIEMIVKSQQRIVDSIGEAFGFPKKMKISPGI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0309 382 MobiDBLite consensus disorder prediction 89 108 - -
Lele42g0309 382 MobiDBLite consensus disorder prediction 46 60 - -
Lele42g0309 382 MobiDBLite consensus disorder prediction 46 108 - -
Lele42g0309 382 SMART 118neu2 117 207 IPR006578 -
Lele42g0309 382 Pfam Myb/SANT-like DNA-binding domain 109 202 IPR044822 -
Lele42g0309 382 ProSiteProfiles Myb-like domain profile. 109 172 IPR001005 -
Lele42g0309 382 FunFam Trihelix transcription factor ASIL2 110 177 - -
Lele42g0309 382 Gene3D - 110 177 - -
Lele42g0309 382 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 83 365 IPR044823 -
Lele42g0309 382 MobiDBLite consensus disorder prediction 61 75 - -
Lele42g0309 382 MobiDBLite consensus disorder prediction 221 269 - -
Lele42g0309 382 MobiDBLite consensus disorder prediction 221 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0309 Lele-ChrLele42 2620636 2622396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0309 110 202 Trihelix Transcription Factor Family AT3G14180 37.634 2.40e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele42g0309 Myb_DNA-bind_4 9.1e-19 CL0123