Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0304 ATGGTATTGATTATGTCTTCGTTGACAAGACGAAGGGAAAAAGCAACTGGCTCCATAGTAGGAATCTTTGAGTTAATGGAGTTTTGGGATTCATGGGTTGGCTTCTTGTTGGTTTTTAGCTTCTGGGTTGGTGTTTTCTGTGATCAAGATGGTTTCTTAAGTCTATCTTGTGGTGGAAGAACAAGTTTCAATGATTCATCTAACATCTTATGGACCCCAGACACTGCATACATAAGCACAGGCACTACAGCAATCAGTTACAATGATAATAACAACTCCTCATCGAATGTCTATCTTCGGTTTTTCCCGGATTCCCAAGGTCGAAAATGCTATAAATTACCGTTGAGCAATGCCACGAGTCTTGTTCTTGTTAGAGCCAAGTTTGCGTACAACAACTACGATGGACTTGAACGTCCTCCTACATTCTCTGTCTCTCTTGGAACAGCCATTGCTGCTACTGTAAATCTTACTAAAGATGATCCATGGACTGAAGAGTTTCTATGGACAGTCAATAAGGACACCCTTCCCTTCTGTTTACTTGCTGCCTCAAATGGTGGGTTTCCCGTGATTTCTTCCCTCGAAATCCGACCACTTCCTCAAGGAGCCTACACAAATGGCATGGAACATTTCTCAAATAAGTTACTGAGGAAGAGTTATCGAATCGATTGTGGCTCTGCTAATGAGTCTATCCGGTACCCTTTGGATCCATATGATAGAATATGGGAAGCTGATAGAAGTTTTACACCCTTTCACGTTGCAACTGGGTTCAAGATTCAGCTTTCTTTGAATCAGTCCAGTCTGATGGAAAAGCTACCGGCTGCTGTTCTTCAAACCGGGAGAGTTCTGGCACGGCGAAATCTGCTGACGTATAACCTCCCTCTTGATGCAGTAGGGGACTATTATATCATTCTTTATTTTGCTGGCATACTTCCTGTTTTCCCCTCCTTTGATGTGTTCATAAATGGAGATATTATAAAATCAAACTACACAATAAATAGTTCAGAAATCAGTGCTCTATATGTGACAAGAAAGGGAATCAGAAGATTGAACATAACACTGAAGAGTAGCAGCTTTTACCCTCAAATCAATGCATTTGAGGTATATCAGATGGTTGATATTCCACCTGAAGTTTCTTCCACAACAGTCTCAGCACTACAGGTTATTCAGCAGTCTGCTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCCCCTTCACCATGGGATCATACTGGGTGTGAAGGAAGCCTTGTTACATCACTGGATCTCTCTGGTGTGAATTTCAGATCAATTACTCCTACATTTGGTGACTTGTTGGACCTCAAAAAATTAGATTTGCACAACACATCGCTTGCTGGTGAAATACAGAACTTGGGTAGCTTGCAACGTCTTGAGAAACTGAACCTGAGTTTCAATCAGCTAAAATCCTTCGGCGTGGACCTGGACAACTTGGTTAGCCTTGAAATCTTAGACTTGCAAAACAATAGCCTCCAAGGATTGGTTCCTGATAGCGTGGGAGAGTTAGAAAACCTGCACTTTCTGAATCTGGAAAACAACAAGCTACAAGGTCCACTACCAGAGTCCTTGAACAAACCAACCATAGAGATCAGAACATCTGGGAATTTGTGTCTTTCGTTCTCGGCAGCCATATGTGATGGTGAATCATTCACTCCTTCAATTGAGGCACCACAAGTTACAATAATTCCCAGAAAGAAACACAAAACACATAAAAATTTAGCAATTATACTAAGCTTGGTTGGTGGAGCCACACTTGTGCTTTTCATGATCTTTCTTTCAGTACTGCTACACATGACTAAAAGGAGATATGAAGTCTCTCACACTGCAAGAGCAGAAATTGATATAAGGAACTGGGGTGCAGCAAAAGTGTTTTCATACAAAGAAATTAAAGTAGCTACTGGAAATTTTAAAGAAGTTATAGGAAGAGGCAGTTTTGGATCGGTTTACCATGGAAAGCTTCCAGATGGTAAATCAGTCGCCATCAAAGTTCGGCTGGACAAAACCCAACTAGGAGCTGATTCTTTCATCAATGAGGTTCATCTTTTGTCAAAAATCCGCCATCAAAATCTTGTGTCATTGGAAGGATTTTGTTATGAATCAAAGCATCAGATACTAGTGTATGAGTACTTGGCTGGGGGATCACTAGCTGATCATCTCTATGGTACAAACAGCCAAAAGAGGTCATTAAGCTGGGTTCGAAGATTGAAAATTGCAGTGGATGCAGCAAAAGGATTGGATTATTTACATAATGGAAGTGAACCGCGAATCATACACCGCGATGTCAAGTGCAGTAATATCCTCTTGGATGTGGAGATGAATGGAAAAGTCTGTGACTTTGGCCTCTCTAAGCAAGTAACCAAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGCTATCTAGACCCTGAGTATTATTCCACCCAACAGCTCACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTCCTTTTGGAACTCATCTGTGGGAGAGAGCCATTGAATCACTCTGGATCTCCTGATTCTTTCAATTTGGTGTTATGGGCAAAGCCTTACTTGCAGGCAGGAGCATTTGAAATTGTGGATGACAGCATAAAAGGGAATTTTGATGTAGAGAGCATGAGGAAGACAGCCTACATTTCTGTGAAGTCAGTGGAAAGGGATGCATCACTGAGACCAACTATTGCAGAAGTATTAGCAGAACTAAAGGAAGCCTATGATATTCAGCTCAGATACCTTGAGTCTCTCTAA 2778 0.4161 MVLIMSSLTRRREKATGSIVGIFELMEFWDSWVGFLLVFSFWVGVFCDQDGFLSLSCGGRTSFNDSSNILWTPDTAYISTGTTAISYNDNNNSSSNVYLRFFPDSQGRKCYKLPLSNATSLVLVRAKFAYNNYDGLERPPTFSVSLGTAIAATVNLTKDDPWTEEFLWTVNKDTLPFCLLAASNGGFPVISSLEIRPLPQGAYTNGMEHFSNKLLRKSYRIDCGSANESIRYPLDPYDRIWEADRSFTPFHVATGFKIQLSLNQSSLMEKLPAAVLQTGRVLARRNLLTYNLPLDAVGDYYIILYFAGILPVFPSFDVFINGDIIKSNYTINSSEISALYVTRKGIRRLNITLKSSSFYPQINAFEVYQMVDIPPEVSSTTVSALQVIQQSAGLDLGWQDDPCSPSPWDHTGCEGSLVTSLDLSGVNFRSITPTFGDLLDLKKLDLHNTSLAGEIQNLGSLQRLEKLNLSFNQLKSFGVDLDNLVSLEILDLQNNSLQGLVPDSVGELENLHFLNLENNKLQGPLPESLNKPTIEIRTSGNLCLSFSAAICDGESFTPSIEAPQVTIIPRKKHKTHKNLAIILSLVGGATLVLFMIFLSVLLHMTKRRYEVSHTARAEIDIRNWGAAKVFSYKEIKVATGNFKEVIGRGSFGSVYHGKLPDGKSVAIKVRLDKTQLGADSFINEVHLLSKIRHQNLVSLEGFCYESKHQILVYEYLAGGSLADHLYGTNSQKRSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDVEMNGKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLNHSGSPDSFNLVLWAKPYLQAGAFEIVDDSIKGNFDVESMRKTAYISVKSVERDASLRPTIAEVLAELKEAYDIQLRYLESL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0304 925 SUPERFAMILY L domain-like 383 533 - -
Lele42g0304 925 PANTHER OS07G0107800 PROTEIN-RELATED 480 915 - -
Lele42g0304 925 ProSiteProfiles Leucine-rich repeat profile. 463 485 IPR001611 GO:0005515
Lele42g0304 925 Gene3D Ribonuclease Inhibitor 382 553 IPR032675 -
Lele42g0304 925 CDD STKc_IRAK 646 913 - -
Lele42g0304 925 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0304 925 Coils Coil 908 925 - -
Lele42g0304 925 SUPERFAMILY Protein kinase-like (PK-like) 623 911 IPR011009 -
Lele42g0304 925 Pfam Malectin-like domain 55 370 IPR024788 -
Lele42g0304 925 SMART LRR_typ_2 484 507 IPR003591 -
Lele42g0304 925 SMART LRR_typ_2 508 532 IPR003591 -
Lele42g0304 925 SMART LRR_typ_2 461 483 IPR003591 -
Lele42g0304 925 Gene3D Transferase(Phosphotransferase) domain 1 716 921 - -
Lele42g0304 925 Pfam Protein tyrosine and serine/threonine kinase 642 846 IPR001245 GO:0004672|GO:0006468
Lele42g0304 925 Pfam Leucine rich repeat 463 521 IPR001611 GO:0005515
Lele42g0304 925 Gene3D - 217 371 - -
Lele42g0304 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Lele42g0304 925 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 716 922 - -
Lele42g0304 925 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Lele42g0304 925 FunFam serine/threonine-protein kinase PBS1-like 608 715 - -
Lele42g0304 925 ProSiteProfiles Protein kinase domain profile. 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0304 925 Gene3D Phosphorylase Kinase; domain 1 603 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0304 Lele-ChrLele42 2572318 2580302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0304 26 924 Receptor kinase-like Gene Family AT5G48740 62.778 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele42g0304 Malectin_like 1.2e-54 CL0202