Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele42g0302 | ATGTCTGTTCAACTCAAGGAAGGAGGAGTAGTCTCCGCTTCTTCTTCATCTTCTTGGCTCAACAACAACCCTTTCCATTTTCACAAGACCAGCAAAATCGAAGAAAGCGATGAAGAACTGTTCAGAGTGCCGGACATGGAAGCAGCGGCGGGTGGCCGAGAGTGTGGAGGAGGAGGGGGTGTTGTTTCGAATGGGAATGCGAAGGCAGCGGCAAGCTTAAGTAATGTGACAGTGACAGATGGTCAGTTTCAGAGTAATGGAAAACGAAGAAGAGGAAGAAACCCTGCAGATAAAGAGTGCAGGCGCCTCAAGAGGTTGTTAAGGAATAGGGTATCAGCACAGCAAGCAAGAGAAAGGAAGAAGGTGTATGTGAATGAGTTGGAAGCAAGAGCTAAGGAGATGCAAGACAAGAATTGCAAGTTGGAAGAGCGTATCTCTACTTTGATCAATGAGAACACTATGCTTCGTAAGGTTCTTCTGAACACAAGGCCTAAACCTGATGACACCACTGAACAACCAAAGCACGATCAGTTAACTAAAACCTGA | 546 | 0.4615 | MSVQLKEGGVVSASSSSSWLNNNPFHFHKTSKIEESDEELFRVPDMEAAAGGRECGGGGGVVSNGNAKAAASLSNVTVTDGQFQSNGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEARAKEMQDKNCKLEERISTLINENTMLRKVLLNTRPKPDDTTEQPKHDQLTKT | 181 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele42g0302 | 181 | MobiDBLite | consensus disorder prediction | 77 | 99 | - | - | |
| Lele42g0302 | 181 | Gene3D | Single helix bin | 120 | 161 | - | - | |
| Lele42g0302 | 181 | Coils | Coil | 117 | 144 | - | - | |
| Lele42g0302 | 181 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 12 | 175 | IPR044280 | GO:0000981|GO:0045944 | |
| Lele42g0302 | 181 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Lele42g0302 | 181 | MobiDBLite | consensus disorder prediction | 160 | 181 | - | - | |
| Lele42g0302 | 181 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 99 | 162 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele42g0302 | 181 | SMART | brlzneu | 97 | 161 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele42g0302 | 181 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 104 | 119 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele42g0302 | 181 | SUPERFAMILY | Leucine zipper domain | 101 | 159 | IPR046347 | GO:0003700|GO:0006355 | |
| Lele42g0302 | 181 | MobiDBLite | consensus disorder prediction | 161 | 181 | - | - | |
| Lele42g0302 | 181 | Pfam | bZIP transcription factor | 98 | 157 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele42g0302 | 181 | CDD | bZIP_HY5-like | 111 | 152 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele42g0302 | Lele-ChrLele42 | 2565961 | 2567287 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele42g0302 | 85 | 168 | Basic region leucine zipper (bZIP) Transcription Factor Gene Family | AT3G17609 | 77.381 | 2.48e-40 | 131 |
Transcription factors information