Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0291 ATGGAAGGATTAGATGGGTTGATAGATAAGCTTTTAGAAGCGAGGAAAAACAGAGGCAAGAGGATTCAATTAATTGAGCCAGAAATTCGCAATCTCTGCCTCACTGCTAAAGATATCTTCCTCAACCAACCAAACCTTCTTGAGCTTGAAGCTCCCATCAATGTTTGTGGGGACATACATGGCCAATACCCAGATCTGTTGAGATTGTTCGAGTACGGTGGTTTTCCGCCGCAATCGAATTACCTCTTCCTCGGAGACTACGTTGACAGAGGGAAACAAAGTGTTGAAACCATATGTCTACTTCTCGCTTACAAGATCAAGTTCCCGGAGAACTTTTTCCTTCTCCGAGGGAATCACGAATGCGCCTCCATTAACAGAATCTACGGATTCTACGACGAGTGCAAGAGGAGATTCAGCGTGCGACTCTGGAAGATCTTCACCGATTGTTTCAATTGCCTGCCCGTCGCAGCGGTAATTGACGACAAGATCCTGTGTATGCACGGCGGTCTGTCGCCGGGGATGGAGAACATGAATCAGATTAAGGATATAGAGAGGCCTGTGGATGTACCGGATCAGGGATTGTTGTGCGACTTGCTTTGGGCTGATCCAGATAGAGAAATCAAAGGTTGGGGTGAGAATGACAGAGGAGTGTCGTTCACTTTCGGAGCTGATAAAGTTGAAGAGTTCTTGAAGAAGAATGATCTGGATCTCATATGTCGCGCTCACCAGGTGGTGGAGGATGGGGTTTTGGAACTGATCAAAGCAACGGCCATAACGGACGAGTGGTTGAACCAGACAATCCCGGGCTTATCATGTCATTTGGAAGAGCTCAAAATACGCAATATGTTGGAGAATATGAAATTCGAAAACTACAGCCTTAAGAAGTTCTCATTTGCAAACATCTCATTGCCAAATAACCTATCAAATATTTCCATACTGAACGATTTCCTTGAGTGCTTTAATCACTTCAAAAACCTCTCTTTATCTTGTGCCACATTTGAGTATATGATCTTTCCAGAAAAGCTATTGCAGGATAAGAATTCATCTCCACTGTATGATTTGATGGATCTAAACTTAGAAGTGATTAATTATCCATTACCACATGGTCAACTTTTGAGGGGAGTGTTGAACATTTGCTTTGGTTAA 1146 0.4337 MEGLDGLIDKLLEARKNRGKRIQLIEPEIRNLCLTAKDIFLNQPNLLELEAPINVCGDIHGQYPDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSVETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPGMENMNQIKDIERPVDVPDQGLLCDLLWADPDREIKGWGENDRGVSFTFGADKVEEFLKKNDLDLICRAHQVVEDGVLELIKATAITDEWLNQTIPGLSCHLEELKIRNMLENMKFENYSLKKFSFANISLPNNLSNISILNDFLECFNHFKNLSLSCATFEYMIFPEKLLQDKNSSPLYDLMDLNLEVINYPLPHGQLLRGVLNICFG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0291 381 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Lele42g0291 381 FunFam Serine/threonine-protein phosphatase 1 259 - -
Lele42g0291 381 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Lele42g0291 381 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Lele42g0291 381 Gene3D - 7 259 IPR029052 -
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Lele42g0291 381 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Lele42g0291 381 SMART pp2a_7 24 286 IPR006186 GO:0016787
Lele42g0291 381 SUPERFAMILY Metallo-dependent phosphatases 22 253 IPR029052 -
Lele42g0291 381 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 16 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0291 Lele-ChrLele42 2470719 2475064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0291 31 240 Calmodulin-binding Proteins AT5G63870 32.400 1.37e-30 117