Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0290 ATGAAGGCAGAATCTGGTAAACGGAGGAGCCTCTGCCTCGCCGTGACGGCAGCTCTGGTGATTGCAATCGTCTTAATCGTAGTGATTTTGGCCTTCAAGGTGTTCAAACCCAAGCGTACCGTTGACACCGTCGATTCCATCACGATTCAGGAGATGCACGTCGGTCTCGATGTTGCCAAGCTCATCGTCGATCTCAACATCACCCTCGGCGTCCAAGTTTCAATCATTAACCCGAATCATGTCGGATTCAAGTACTCCAACTCCAACGCCCTCCTCAATTACAGAGGCCAGCTCGTCGGAGAAGCACCTATTCAGGCCGGCGAAATCTCCGCCGGCGAGACAGAGATCATAACAGTGAGTCTCACCATCATGGCGAACCGGCTCCTCTCTAATTCTCAGCTTTTCTCCGATTATTTCTCCGGTTCATTGCCTCTTAGCACTTGGATTACGATTTCTGGGAAAGTGAGCATCTTACGGTTGATTCATGTCGACGTGATTTCAACTTCGTCCTGTGATTTTGCCATCAATATCTCTAACAAAACCATAGGCCATAAACAGTGCCGTTATAAAGCTAAGCTTAATTAA 585 0.4821 MKAESGKRRSLCLAVTAALVIAIVLIVVILAFKVFKPKRTVDTVDSITIQEMHVGLDVAKLIVDLNITLGVQVSIINPNHVGFKYSNSNALLNYRGQLVGEAPIQAGEISAGETEIITVSLTIMANRLLSNSQLFSDYFSGSLPLSTWITISGKVSILRLIHVDVISTSSCDFAINISNKTIGHKQCRYKAKLN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0290 194 SUPERFAMILY LEA14-like 65 155 - -
Lele42g0290 194 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 179 - -
Lele42g0290 194 Pfam Late embryogenesis abundant protein 73 162 IPR004864 -
Lele42g0290 194 Gene3D - 31 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0290 Lele-ChrLele42 2464978 2465562 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0290 42 2464978 2465562 Lele37g1417 37 22866707 22870526 CCT
Lele42g0290 42 2464978 2465562 Lele38g1293 38 23665016 23665979 CCT
Lele42g0290 42 2464978 2465562 Lele39g0007 39 69341 72073 CCT
Lele42g0290 42 2464978 2465562 Lele40g1241 40 22162877 22166820 CCT
Lele39g0009 39 89230 91371 Lele42g0290 42 2464978 2465562 CCT
Lele40g1238 40 22147559 22148834 Lele42g0290 42 2464978 2465562 CCT
Lele42g0290 42 2464978 2465562 Lele43g1075 43 19212805 19213392 hybridization
Lele42g0290 42 2464978 2465562 Lele44g1059 44 19303179 19303763 hybridization