Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0289 ATGACAGAATCAACAATAACCACACACAACGAAAGCCAGATCATGGTTTCACAAAGTAGAATCAAGAAGAGAAGAAGGTGTCGTCTTCTTCTAGGTTTACTTCTACTTTTACTGATACTGATCTTCATTGTGGCTCTGGTTCTGGCCTTAACTGTGTTCAAGCCCAAGAACCCTACAGTTCAACTTGTGTCAGCTTCTCTTGACGGTGTATCACCAAGTGTCTCTTTCCCTGCAATTCAGGTTCATCTCAATCTCACTCTTGATATCAATCTCATGGTTCATAATCCAAACCATGCAAGCTTCAAGCATGAACAGGGCAAGAGCATACTGTTTTACAAGGGCAATCAGATCGGAGACACTGAGATCTTTCCCGGCGTGCTTCCGGCGAAGAGGTCGGCGGTGCTTCCGAGCCGGCTTACGTTGCAGGTGGATAGGCTAGCATCCGATATTACCAGTTTGATCGGAGATTTAATGGGTGGGGAACTGTCTATGGAATCTTCTACTCAGATTCCAGGCAGAGTCACTGTTCTTGGATTCATTAAAAGACATGCTGTTGCACTTTCTGAATGTCAGTTCACTATTGACATTTCCGACAGGAAGATTCGGTCCCAATCTTGCAAAAATAAGACCAAGTTCTGA 639 0.4429 MTESTITTHNESQIMVSQSRIKKRRRCRLLLGLLLLLLILIFIVALVLALTVFKPKNPTVQLVSASLDGVSPSVSFPAIQVHLNLTLDINLMVHNPNHASFKHEQGKSILFYKGNQIGDTEIFPGVLPAKRSAVLPSRLTLQVDRLASDITSLIGDLMGGELSMESSTQIPGRVTVLGFIKRHAVALSECQFTIDISDRKIRSQSCKNKTKF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0289 212 Gene3D - 43 189 - -
Lele42g0289 212 Pfam Late embryogenesis abundant protein 91 188 IPR004864 -
Lele42g0289 212 SUPERFAMILY LEA14-like 38 167 - -
Lele42g0289 212 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 22 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0289 Lele-ChrLele42 2461516 2462154 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0289 42 2461516 2462154 Lele42g0289 42 2461516 2462154 ECH
Lele42g0289 42 2461516 2462154 Lele43g1076 43 19217212 19217853 hybridization
Lele42g0289 42 2461516 2462154 Lele44g1060 44 19306680 19307318 hybridization