Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0276 ATGGCAGCCATGGCTCAGCTTCGTTTTTCTCCTCTCTCTGGTTCCTATCACACCGTTTCAGGGTCAGACGCTCCCGCATTCAACCCCCGTTCTGTTATTCCGTTCCCATGCTCCTTCCACCCTCGAAATCGATCTCTGCCTCTCATCCACCCAAAGGTTTACGAGCCCACTTTGCCGGAGGATCTGCAAATTTCATTTGCCGGCGGTGATGGTAGCGACAGGGTTGGGCGCGGAGGAGGTGACAACAGCAACGGCGGCAGCGGAGATTGGGGAAACCACGGGAATTCCGATGATGATCCATCTTCATCATCGTCTAACGGACTCGGTATTCTGGGCATGTTTCTGGCGGGATGGAGATCCAGGGTGGCCGCGGATCCCCAATTCGCTTTCAAGGTTCTGATGGAAGAATTGGTGGGTGTGAGCGCTTGCATCGTCGGAGACATGGCTTCTCGTCCAAATTTCGGATTGAACGAGCTTGATTTCGTTTTCTCCACACTCGTCGTCGGATCAATCCTGAATTTCACCGTCATGTATCTATTAGCACCCACTGTGGCTTCTTCTTCATCCTCAACTCTACCTTCAGTCTTTGCAAGCTGCCCTACAAGCCATATGTTTGAACCAGGTGCTTATGGGATCCTCGATCGATTTGGAACACTAGTGTACAAAGGAACCGTGTTTGCAGTTGTTGGATTTGCAGCTGGGCTTGTAGGAACTGCAATTTCAAATGGGTTAATCATGATCAGGAAGAAGATGGATCCAAACTTTAAGACACCAAACAAGCAACCTCCGACATTGTTGAATGCTATGACATGGGCGGCTCACATGGGATTTGGCAGCAATCTGAGGTACCAAACACTGAATGGGATTGAATTTGTGTTGGAGAAAGGGCTTCCTCCATTGGCATTCAAATCAGCTGTGGTTGTTCTGAGATTGTTGAACAATGTTGTTGGAGGCATGACGTTTGTGATGCTGGCGAGGTTCACTGGTTCACAGAGTGTATCAGAACAACAAAAGCCATTAGCTGTTGCAGCAGAGAAGGAGAGCAGAGGAGAGGATTTGCAGAGCTCAAAGTGA 1074 0.4935 MAAMAQLRFSPLSGSYHTVSGSDAPAFNPRSVIPFPCSFHPRNRSLPLIHPKVYEPTLPEDLQISFAGGDGSDRVGRGGGDNSNGGSGDWGNHGNSDDDPSSSSSNGLGILGMFLAGWRSRVAADPQFAFKVLMEELVGVSACIVGDMASRPNFGLNELDFVFSTLVVGSILNFTVMYLLAPTVASSSSSTLPSVFASCPTSHMFEPGAYGILDRFGTLVYKGTVFAVVGFAAGLVGTAISNGLIMIRKKMDPNFKTPNKQPPTLLNAMTWAAHMGFGSNLRYQTLNGIEFVLEKGLPPLAFKSAVVVLRLLNNVVGGMTFVMLARFTGSQSVSEQQKPLAVAAEKESRGEDLQSSK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0276 357 Pfam Protein RETICULATA-related 121 289 IPR021825 -
Lele42g0276 357 MobiDBLite consensus disorder prediction 65 104 - -
Lele42g0276 357 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 111 338 - -
Lele42g0276 357 MobiDBLite consensus disorder prediction 342 357 - -
Lele42g0276 357 MobiDBLite consensus disorder prediction 85 104 - -
Lele42g0276 357 MobiDBLite consensus disorder prediction 334 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0276 Lele-ChrLele42 2347543 2348616 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0276 42 2347543 2348616 Lele43g1089 43 19311197 19317902 hybridization
Lele42g0276 42 2347543 2348616 Lele44g1073 44 19430454 19431536 hybridization