Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0273 ATGGTCTATGTTTGTGCTGTGCCATTTGTAGTGTATGCACTGGTCCAAATCAAGAGAAGTTTGATTGATCCCAACAACCATCTGAAGAGCTGGAATAAGGGAGACCCATGTAATTCAAACTGGACTGGCGTTTGGTGTTTTGATAGGGTTGGGACTGATGGATACCTACATGTCCATGAGCTTTACTTGATGACTTCGAATCTCTCGGGAAGTCTAGCACCTGAGCTTGGTCTGCTATCTCGGCTTCAGATAATGAATTTCATGTGGAATGATCTAACAGGCACCATACCAAAGGAGATAGGAGATATCAAATCATTGAAACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAGCTTGGCAATCTCTCAAACTTGAATAGGTTCCAAGTTGACCTAAACCAATTGTCAGGTCCAATACCACAATCGTTTGCCAACTTGGCCAGTGTTAAACACCTCCACTTGAACAATAACTCGTTTACTGGTCAAATTCCACGTGAACTTTCAAAGCTACCCAAACTATTGCATTTGCTTGTGGACAATAACAACTTTACTGGCCATCTTCCACCAGAATTTTCCATGTTAATGGCATTGCGCATACTCCAAGTTGATAACAACAATTTCAGTGGAGCAGAAATCCCTTCTACCTATGCAAACTTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGGAAGGAGCTGTTCCTGATCTGAGTTCAATAATTGAGCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGATCCGTACCACCAAAGAAACTTTCAGATAATATAACAACTATTGACTTATCAAATAACCAGATCAACGGATCTATTGCTGAAAGCTTCATATTACTTCCTTCACTTCAAAGATTGTCACTAGCGAACAATTCTTTTTCTGGATCCATACCTATCGGTATATTGCTGAACATGTCCAATAGGGATGCTAAGCTCACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCAAGTCTACCAGCAAATATCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCTAACGTTCAAGATATCATTCGATATTGTGACTCTGAAGGGGTTGAATCTGACAAACCTATAAATTCAGCATCTGCCTGTCTTGTTCAATCTTGTCCAAGGGATGAGTCCTATGAATATGTCCCAGCTTCTCCTGTTCACTGCTATTGTGCATCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTACTCCTTATAGAACTTATTTCGAGTCGTATCTAGCTCAGGATTTATATTTGGACTCATACCAAGTATGGATAGATTCAATTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAGTTACAATGATTCCCTCTCTTATGTGTTCAATATAAGCGAGGTCCGGCGTATTCAAGGCAAATTTGGATCATGGAATTTTACTCCCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGACCTTATGAACATTTAATTGGTGGCGAGACAAATAAGAGGAAGATCAGTACAACTGTATTGATAGTTGCCATAATTGCAGCTATTGTTTGTGCTACCGTGATCTCTGCAATTGTCACTCTAGTGATAGCCAAAAGACTTATCAAATGCCGTCCCATGCTATCGAGGAATCCTATGTCCTCTAATATTTTCATCAAAATTGATGGTGTGCAAGCGTTCACTCTCAAAGAACTGGCTCATGCAACTAACAATTTCTGCAGTTCAACTATAGTTGGCCGAGGAGGTTATGGGAAGGTTTATAAAGGAATTCTGTCTGATGAAACAGTCGTGGCCATAAAGCGAGCTGACGAAGGTTCTTTGCAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGTAATGAAGGAGGAGAGCAGATTCTGGTTTACGAGTTCATGCATAATGGTACCTTGCGGGAGTGGATTTTGGGTAAAAGGAAGGGAAACCTAAACTTTGGTAAGAGGTTGAGGATTGCAATGGGTGCCGCCAAAGGTATACTGTACCTCCATACCGAGGCTAACCCTCCTATATTCCACCGAGACATTAAATCTAGCAACATACTTCTGGACCGCATTCTGGTTGCTAAGGTGGCTGACTTCGGACTCTCACGCCTTGCTCCGTATATGGATGCCGAAGGAAACATGCCTAAATATGTGTCAACAGAGAACGTGAGGGGAACACCGGGATACATTGATCCTGATTACTTTTTGAATCTTAAGTTCACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAAGCATGCATCCAATATTGCATGGGAGACACATCGTTCGTGAGGTTAACGAGGCTCGTGAGTGTGGGACGATATCTTCCATTATAGATAGCAAAATGGGCTCATATCCATCAGATTGTGTGGAGAAGTTTATAAATCTTGGCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCATGCATGACAGGTGTGGTGAGGGAGCTGGAGATTATTCTCTCAATGTTGCCAGATTCCGAAACTGCTTTCCCAGACAGTTCATCTGATTTTTCTGGCAAAATGGCTTCAACATCGACGTCGTCATCAACATCCTACATGGCAAGAGACGGCCACCAACACATGTCCTCTCCTATGTTGCCAGGAAGCAACCTCGTCAGTGATGTCATTCCCACCATCGTTCCTCGTTAA 2811 0.4176 MVYVCAVPFVVYALVQIKRSLIDPNNHLKSWNKGDPCNSNWTGVWCFDRVGTDGYLHVHELYLMTSNLSGSLAPELGLLSRLQIMNFMWNDLTGTIPKEIGDIKSLKLLLLNGNKLSGSLPDELGNLSNLNRFQVDLNQLSGPIPQSFANLASVKHLHLNNNSFTGQIPRELSKLPKLLHLLVDNNNFTGHLPPEFSMLMALRILQVDNNNFSGAEIPSTYANFSKLVKLSLRNCSLEGAVPDLSSIIELTYLDLSWNHLTGSVPPKKLSDNITTIDLSNNQINGSIAESFILLPSLQRLSLANNSFSGSIPIGILLNMSNRDAKLTIDLRNNSFSDISGSSSLPANITLRLAGNPICKNSNVQDIIRYCDSEGVESDKPINSASACLVQSCPRDESYEYVPASPVHCYCASPLRIGYRLKSPSFSYFTPYRTYFESYLAQDLYLDSYQVWIDSIAWEAGPRLRMYLKLYPSYNDSLSYVFNISEVRRIQGKFGSWNFTPTDFFGPYELLNFTLLGPYEHLIGGETNKRKISTTVLIVAIIAAIVCATVISAIVTLVIAKRLIKCRPMLSRNPMSSNIFIKIDGVQAFTLKELAHATNNFCSSTIVGRGGYGKVYKGILSDETVVAIKRADEGSLQGQREFLTEIELLSRLHHRNLVSLVGYCNEGGEQILVYEFMHNGTLREWILGKRKGNLNFGKRLRIAMGAAKGILYLHTEANPPIFHRDIKSSNILLDRILVAKVADFGLSRLAPYMDAEGNMPKYVSTENVRGTPGYIDPDYFLNLKFTDKSDVYSLGIVFLELLTSMHPILHGRHIVREVNEARECGTISSIIDSKMGSYPSDCVEKFINLGLSCCHENPEERPCMTGVVRELEIILSMLPDSETAFPDSSSDFSGKMASTSTSSSTSYMARDGHQHMSSPMLPGSNLVSDVIPTIVPR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0273 936 Pfam Leucine rich repeat N-terminal domain 13 46 IPR013210 -
Lele42g0273 936 SUPERFAMILY L domain-like 24 362 - -
Lele42g0273 936 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Lele42g0273 936 SMART serkin_6 600 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0273 936 Gene3D Ribonuclease Inhibitor 11 168 IPR032675 -
Lele42g0273 936 MobiDBLite consensus disorder prediction 883 908 - -
Lele42g0273 936 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 676 886 - -
Lele42g0273 936 FunFam Leucine-rich repeat protein kinase family protein 566 675 - -
Lele42g0273 936 Gene3D Ribonuclease Inhibitor 271 358 IPR032675 -
Lele42g0273 936 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 8 169 - -
Lele42g0273 936 Gene3D Ribonuclease Inhibitor 169 270 IPR032675 -
Lele42g0273 936 SUPERFAMILY Protein kinase-like (PK-like) 585 903 IPR011009 -
Lele42g0273 936 Pfam Protein tyrosine and serine/threonine kinase 605 870 IPR001245 GO:0004672|GO:0006468
Lele42g0273 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Lele42g0273 936 ProSiteProfiles Protein kinase domain profile. 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0273 936 Gene3D Transferase(Phosphotransferase) domain 1 676 885 - -
Lele42g0273 936 PANTHER RECEPTOR-LIKE PROTEIN 55 17 876 - -
Lele42g0273 936 Gene3D Phosphorylase Kinase; domain 1 566 675 - -
Lele42g0273 936 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0273 Lele-ChrLele42 2325334 2338899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0273 8 882 Receptor kinase-like Gene Family AT5G01950 58.864 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele42g0273 PK_Tyr_Ser-Thr 7.1e-45 CL0016