Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0267 ATGCGCGACACTAGAAGGTTCTGGGTGATGAGGAACATCAAAGGGTTTCTTCCATGGATTTTTCTTCTCTTAGCTTTTCAAGTTGTTCGAGCTGCGGATTACGTGCCGTCTGATAAAATCCTATTGAGCTGTGGGGGTCCTCCAGATTCAACCGATACTGATGGAAGAAAATGGACTTCTGATGTCGGGTCCAAGTTCTTATCCTCAACGAGAAAGTCCAAGAAAGCTGAGGCTTCAACACAAGATCCCTCCGTGCCGGAAGTTCCGTTTATGACGGCGCGTGTGTTCCAGTCGGAACTCACCTACACTTTTCCGGTGGCATCTGGTCGGAAATTCATCCGTCTCTACTTCTACCCTTCTTCTTATGACGGACTTAATGCTTCCGATGCGATTTTCTCCGTCACTGCTCAATCCTACACGCTTCTTAGGAACTTCAGTGTTTCTCAAACGGTATTAGCTTTGAACTACGACTCTATTGTGAAAGAATATTTGGTCAATGTTGAAGGAGATTCACTGAATGTAACTTTTACTCCTTCTTGTAATGCTTCTAATGCGTATGCCTTTGTTAATGGGATTGAGATTGTGTCTATGCCTCCTGATATTTATGGTTCTCCTACTGATAGTCCTATGATTGTGGGTACACAGACTCGTTACAATTTTGATAATAGCACTTCCCTTGAGACTGTTTATAGGCTTAATGTTGGTGGGAATGATATTTCTCCTTCCCATGATACTGGTTTGTTCAGGTCATGGACTGATGATACTAAGTATCTCTATGGTGCTGGTTATGGAGTCACTGAGCCTGCTGATCCTGAGGTTAACATCACCTATCCTCCAGGCACACCCTCTTATGTTGCTCCTGTTGATGTCTACTCTACGGCTAGATCGATGGGGCCGATTGCGAATATCAATGTGAATTACAACTTGACTTGGATTTTCTCTGTTGATTCTGGGTTTTCTTATCTTGTGAGACTCCATTTTTGTGAGGGTACTGTCAATATCACCAAGATTAATCAGAGGGTGTTTGATATATTCATTGGTAATCAAACTGCTGAAGACGAAGCGGATGTTATCGCCTGGGCGGTGGATCAATATGATCTTCCACATGATAATGGGGTTCCAGTGCATAGGGAGTATGTTGCCTTTGTTCCTGTTGGGCAGCCGCAACAGGACCTGTGGCTTGCACTACATCCAGATACTAAGTCAAAGGCTCAGTACTATGATGTAATATTGAATGGAGTGGAGATATTCAAAATTAATGATACTACTGGTAATCTTGCTGGGCCAAATCCTATTCCTGCTCCAGAGCAAGAGTTGATCGATCCGTCATTGGCTAGAAGCTCGAGTAAAGGCCAATCGAGGAGTCAGATAAGAGCAATTGGTGGAGGTGTTAGCGGGGGAGTAGTTCTATTACTTGTTGGTCTCATTGCCTGTTTTGTTTTGCGTCGTAGGAGTCATGGCAAGAAGGATTCTGGTACAAGTGAAGGGCCATCTGGCTGGCTTCCTCTTTCTCTTTATGGAAACTCCCATTCCGCCGGTTCTGCCAAGTCCAACACGACTGGAAGCTATGCATCGTCACTCCCATCAAACCTTTGTCGGCATTTCTCATTTGCTGAAATTAAGGCTGCAACAAACAACTTCGATGAGGCTTTGCTCCTTGGTGTGGGAGGATTCGGTAAAGTTTACAAAGGCGAGATTGATGGTGGAACGACCAAATTAGCAATTAAACGTGGGAACCCTCTTTCTGAGCAGGGTGTACACGAGTTCCAAACAGAAATTGAAATGCTTTCTAAACTTCGCCATCGGCATCTTGTTTCGCTGATTGGCTACTGTGAAGAGAACACTGAAATGATCCTTGTGTATGACTACATGGCTTATGGAACTCTCCGGGAGCACCTATACAAGACCCAGAAACCCCCACTGCCATGGAAGCAAAGGCTTGAGATATGCATCGGAGCCGCTCGAGGTTTACACTATCTACATACTGGTGCCAAGCACACTATCATCCACAGAGATGTGAAGACCACAAACATTTTACTGGATGAGAAGTGGGTAGCAAAGGTTTCTGATTTTGGCTTGTCAAAAACTGGTCCAACATTGGATAACACCCATGTGAGCACTGTAGTTAAGGGCAGTTTTGGGTACTTGGATCCAGAGTACTTCAGGAGGCAACAACTGACTGACAAATCCGATGTTTACTCCTTCGGGGTGGTTCTTTTTGAGATCCTGTGCGCTCGCCCAGCTTTGAACCCGACCCTTCCAAAAGAGCAAGTGAGCTTAGCAGAGTGGGCCGCTCATTGCTACAAGAAGGGCATTCTTGACCAGCTCGTTGATCCTTACTTGAAGGGCAAGATAGCTCCAGAATGCTTCAAGAAGTTTGCCGAGACCGCGATGAAGTGCGTGGCTGATCAGGGCATCGAGAGGCCATCAATGGGGGATGTGCTGTGGAACCTCGAGTTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAGAGTGGCAAGGGCATTGGAGGAATGGACAACATTGACGAGGAGGAGCCAATGTATGTGGACTCCAAAGGCAAGAAGGACCCGAACGACGCATTACCGGGTTTCAACGGTAATGTAACCGATTCCCAAAGCTCAGGGATGAGTATGAGCATCGGGGGTCGGAGCTTGGCCAGCGAAGACTCTGATGGATTAACACCAAGCGCTGTGTTTTCTCAGATCATGAATCCAAAGGGGCGTTAA 2727 0.4609 MRDTRRFWVMRNIKGFLPWIFLLLAFQVVRAADYVPSDKILLSCGGPPDSTDTDGRKWTSDVGSKFLSSTRKSKKAEASTQDPSVPEVPFMTARVFQSELTYTFPVASGRKFIRLYFYPSSYDGLNASDAIFSVTAQSYTLLRNFSVSQTVLALNYDSIVKEYLVNVEGDSLNVTFTPSCNASNAYAFVNGIEIVSMPPDIYGSPTDSPMIVGTQTRYNFDNSTSLETVYRLNVGGNDISPSHDTGLFRSWTDDTKYLYGAGYGVTEPADPEVNITYPPGTPSYVAPVDVYSTARSMGPIANINVNYNLTWIFSVDSGFSYLVRLHFCEGTVNITKINQRVFDIFIGNQTAEDEADVIAWAVDQYDLPHDNGVPVHREYVAFVPVGQPQQDLWLALHPDTKSKAQYYDVILNGVEIFKINDTTGNLAGPNPIPAPEQELIDPSLARSSSKGQSRSQIRAIGGGVSGGVVLLLVGLIACFVLRRRSHGKKDSGTSEGPSGWLPLSLYGNSHSAGSAKSNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGGTTKLAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCYKKGILDQLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGIGGMDNIDEEEPMYVDSKGKKDPNDALPGFNGNVTDSQSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0267 908 ProSiteProfiles Protein kinase domain profile. 547 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0267 908 SMART serkin_6 547 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0267 908 FunFam Receptor-like protein kinase FERONIA 519 623 - -
Lele42g0267 908 ProSitePatterns Protein kinases ATP-binding region signature. 553 576 IPR017441 GO:0005524
Lele42g0267 908 MobiDBLite consensus disorder prediction 848 908 - -
Lele42g0267 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Lele42g0267 908 Gene3D Transferase(Phosphotransferase) domain 1 624 836 - -
Lele42g0267 908 SUPERFAMILY Protein kinase-like (PK-like) 520 821 IPR011009 -
Lele42g0267 908 Gene3D Phosphorylase Kinase; domain 1 509 623 - -
Lele42g0267 908 Pfam Protein tyrosine and serine/threonine kinase 553 815 IPR001245 GO:0004672|GO:0006468
Lele42g0267 908 MobiDBLite consensus disorder prediction 864 901 - -
Lele42g0267 908 CDD STKc_IRAK 553 819 - -
Lele42g0267 908 PANTHER OS03G0124300 PROTEIN-RELATED 19 488 - -
Lele42g0267 908 Gene3D - 224 420 - -
Lele42g0267 908 Gene3D - 40 197 - -
Lele42g0267 908 FunFam FERONIA receptor-like kinase 39 198 - -
Lele42g0267 908 Pfam Malectin-like domain 42 419 IPR024788 -
Lele42g0267 908 FunFam Receptor-like protein kinase FERONIA 624 834 - -
Lele42g0267 908 FunFam FERONIA receptor-like kinase 224 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0267 Lele-ChrLele42 2267362 2270088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0267 25 908 Receptor kinase-like Gene Family AT3G51550 73.393 0.0 1293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele42g0267 Malectin_like 2.8e-42 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0267 42 2267362 2270088 Lele44g1082 44 19499447 19502170 hybridization