Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0261 ATGATTCCTGATAAACCACTGCTTCCAGAATTAGATTGCTCTCTGGGGATTCATCGGCGTGCACGTAAATCAGGATCTTTCAGTCGGTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACGTAGACGTTGTATCTGCTGGAGACTCTAGTTTTCATGGTGCACTTGAACATTGCACTTCTTTGACAGAGAGGGACTCTCAATCAGCTGAATCCGAGTTTTGCCAGCAGCTACCTTTGGAATGCTCCACTCGAGAGAGGAGGTGCCTGACATCGTGGGGTGCAATGGAACAGCATGATATGAATAGCAATACTGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAGAAGTGTGCAATTTGAAGAGAACCTCCTACATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAATATGAGTTCACGGGAAATGAGATTCGAACTAGTAGATACACAATTATCACCTTCCTGCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCTGCTCTAAATCAGCTCCCTCCACTGGCTGTATTTGGTAGGACTGTGTCTCTTTTTCCCCTCTTGTTTGTTCTTTGTGTCACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCGGACCGCAATGAGAACAACCGAGAGTCTCTAGTGCTTCAATCTGGTGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGCGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCCGTTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAACTTAGATGGTGAATCAAATTTAAAGACAAGGTATGCTCGGCAGGAGATGGCTTCAGCAGTATCGCCAGATTGTTGTACTGTTTCTGGGATCATTAGATGTGAGCAACCAAACAGGAATATTTATGAATTCGCAGCCAACATGGAGTGCAATGGGCATAGGTTTTCCCTTAGCCAATCAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACGGATTGGATAATCGGTGTTGTGGTTTATGCAGGGCAGGAAACAAAGGCTATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCTGTTGGGATGGGTCTTTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAGGGGTCATGATAATGGAAAAAGATACAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACTATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGATGGGGATATGTATGATGTCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATTTGGGTCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACAGAAAATAAGATGGAATTTCGAAGAGCTAGTATACATGGAAGCAATTATGGGAGTTCATTACTTATGGGCGATAATACAATAGCAGCAGCAGTTAGTGGCAGAGGGAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCAGAACTCATAACACTGTTGCACACAGACTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCTATCCTTAGTTGTGGAACAAGTGAGTCAAATGATGGTGTAGAATGTATTGAATACCAGGGAGAGTCTCCTGATGAGCAAGCATTAGTTGCTGCAGCCTCGGCTTATGGATACACACTTTTTGAGCGGACATCAGGACATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGTCTGCACGAGTTTGACAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGATACTTCAATATTTAGCATCTTAGCTGATGAAGTTGACAGTGGTGATAATATACGGCATGCAACTCTGGGCCATTTAAATGAATATTCTTTGCAAGGTTTACGCACACTTGTAGTTGCTTCCAGGAATCTTTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTCTAATAGAATGGAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAACTGCAAGAGGGTGTACCAGAAGCTATTGAGTCCTTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACCGGTGATAAGCAAGAGACAGCGATTTCAATAGGTCTTTCCTGCAAACTTTTGACTTCAGATATGCAGATGATAATTATAAATGGCACATCAGAAAATGAATGCAGAAATCTTTTGGCTGATGCTAAAGCCAAATTTGGTATAAGATCTGTATGTAAAAGAAACCAGAGTATGAGGCACAAAACCAATGACGGACGCGGTGATCTTCAGACTGCCAATAATACAAAGTCATTCAATATGCCTAAATGTGATCTAAGGGAAGAAGGAACTAATGCTCCACTGGCGCTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCGACTTCTTGTAGGGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGATGATATGACGCTGGCTATTGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGGTTCTTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACAGATTGGAGCAGTGTATTCTATTCTGTTATATACACATCAGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCATAAGACACTCTTGCTGTATCCAAAACTGTATGGTGCAGGTCATCGGCATGAGGCTTACAATATGCATTTATTTTGGATCACAATGATTGACACGTTATGGCAGAGTCTTGTTCTCTTCTACATACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTAAATGTACATTTGGCTATGGACGTTAGGCATTGGGTATTAATTACACACGTTGCTGTATGGGGATCAATTATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCCAACTACTGGACTTTTTATCATGTGGCTAAGTCCCCTACATATTGGGTCACAATTTTGCTTATAATTATCGTGGCAATGCTCCCTCGATTTGTCTGTAAAGTCGTTTATCAAGTATTTTGGCCCTCTGATATCCAGATAGCAAGAGAAGCTGAGATAATAACAAAACATCGTGATCTGAGGCCAAGGCAAGAAGTTTCTAGTTATCTGATGAGAGTTGCAGTGGCAGAATGCATTGATGTGAGACCAACATGGTAA 3897 0.4152 MIPDKPLLPELDCSLGIHRRARKSGSFSRYVSFPSTIFDETQSGSFDVKDVDVVSAGDSSFHGALEHCTSLTERDSQSAESEFCQQLPLECSTRERRCLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHRSVQFEENLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPDCCTVSGIIRCEQPNRNIYEFAANMECNGHRFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTRGHDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDVNSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGSNYGSSLLMGDNTIAAAVSGRGRWKLKSEIAVDSELITLLHTDSDRDERIAAHEFFLTLAACNTVIPILSCGTSESNDGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSIFSILADEVDSGDNIRHATLGHLNEYSLQGLRTLVVASRNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIEWNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTSDMQMIIINGTSENECRNLLADAKAKFGIRSVCKRNQSMRHKTNDGRGDLQTANNTKSFNMPKCDLREEGTNAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLLYPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDVRHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWVTILLIIIVAMLPRFVCKVVYQVFWPSDIQIAREAEIITKHRDLRPRQEVSSYLMRVAVAECIDVRPTW 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0261 1298 CDD P-type_ATPase_APLT_Dnf-like 171 1148 - -
Lele42g0261 1298 Pfam Phospholipid-translocating P-type ATPase C-terminal 1016 1256 IPR032630 -
Lele42g0261 1298 Pfam E1-E2 ATPase 253 500 - -
Lele42g0261 1298 FunFam Phospholipid-transporting ATPase 648 792 - -
Lele42g0261 1298 Gene3D - 643 782 IPR023299 GO:0000166
Lele42g0261 1298 Gene3D - 228 398 - -
Lele42g0261 1298 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 818 IPR023299 GO:0000166
Lele42g0261 1298 PRINTS P-type cation-transporting ATPase superfamily signature 988 1007 - -
Lele42g0261 1298 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Lele42g0261 1298 Pfam Cation transport ATPase (P-type) 651 727 - -
Lele42g0261 1298 SFLD Haloacid Dehalogenase 526 1039 - -
Lele42g0261 1298 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1255 IPR023298 -
Lele42g0261 1298 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 958 1074 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele42g0261 1298 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Lele42g0261 1298 SUPERFAMILY HAD-like 537 1034 IPR036412 -
Lele42g0261 1298 FunFam Phospholipid-transporting ATPase 801 1028 - -
Lele42g0261 1298 Gene3D - 802 1028 IPR023214 -
Lele42g0261 1298 SFLD p-type atpase 526 1039 IPR044492 -
Lele42g0261 1298 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 169 1263 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele42g0261 1298 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Lele42g0261 1298 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1266 - -
Lele42g0261 1298 SUPERFAMILY Calcium ATPase, transduction domain A 252 394 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0261 Lele-ChrLele42 2235018 2243070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0261 132 1275 Primary Pumps ATPases AT5G04930 57.552 0.0 1336