Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0260 ATGGAGAATCTGCTGGCGATGAAGGAGCTAGAGAGAGGGCGTGAGTTTGCAAACCAGCTTCAAGGATTGATATTTGGGTCTGGGGATCAAGAAGATAAGGCCTTAACGACGAAGTCTACTGAGGATCTTGCCGCCAAAGTGCTGAATTCTTTCACCAACGCACTATCTCTCTTCAACAATCATCATCATGTTCCTGCAGATTCGTCGCCGTCTTCGTTCTTTTACTTGCCTGCTAACTCTGATGTATCTCACCAGAGCCCTAAGAGCTCTAAGACCAGAAGCCCTAGCAGCATTAAAGATCAAAGAAGCTGCTCTTCCAAGAAAAGATGCACTCATAAGTATGAGCAAGGTTGCAAAGCAACAAAACAAGTTCAACAAATCCAAGACGATCCTCCTCTCTATAGAACCACTTATTTTGGCCACCACACTTGCACCAACCTTCTTAATCCTCAGATCCTTCTTGATGATTCTCATGATGACCTTAATTCAACCTCTGCTTGTATTCTCAGATTCGACAATAATCGTAGTATTACCACCACCTTTGACCAAAAAGTCAAAACACAGCAACAAAACCAGCTCTTTCTCTCGCCCGGCTTCTCTTTATTTCCATCATCTGCTGGTTCTGTCAAAAACGAGGATCATCACTGTCACAACATCAAGCAAGATAAGAACATTAATTACATTAATGATTATATTGATGTTGTTGTCCCTCCTTCATGTTCATCCAATGATTGCCTTGTGTCTCCTGATGAAGAAGAAGCAGTTGATCTTCCTTTTGGATATGGTGATGATCAAGTAGTGGACGTGTTTAATTCTCTTGTGCTGGAAGATCCTTTATTTGATATGATTTTTGATCACTAG 861 0.4158 MENLLAMKELERGREFANQLQGLIFGSGDQEDKALTTKSTEDLAAKVLNSFTNALSLFNNHHHVPADSSPSSFFYLPANSDVSHQSPKSSKTRSPSSIKDQRSCSSKKRCTHKYEQGCKATKQVQQIQDDPPLYRTTYFGHHTCTNLLNPQILLDDSHDDLNSTSACILRFDNNRSITTTFDQKVKTQQQNQLFLSPGFSLFPSSAGSVKNEDHHCHNIKQDKNINYINDYIDVVVPPSCSSNDCLVSPDEEEAVDLPFGYGDDQVVDVFNSLVLEDPLFDMIFDH 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0260 286 Gene3D WRKY domain 89 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g0260 286 SUPERFAMILY WRKY DNA-binding domain 99 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g0260 286 MobiDBLite consensus disorder prediction 81 101 - -
Lele42g0260 286 SMART WRKY_cls 99 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0260 286 MobiDBLite consensus disorder prediction 81 105 - -
Lele42g0260 286 Pfam WRKY DNA -binding domain 103 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0260 286 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 98 166 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0260 Lele-ChrLele42 2228465 2230285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0260 6 191 WRKY Transcription Factor Family AT1G66550 31.507 3.98e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g0260 WRKY 3.2e-09 CL0274