Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0259 ATGAAGGAACTAGAGAGAGGGCGGGAGTTTGTGAACCAGCTTCGAGAATTGATGTTTAGGTCTGGGGATGAAGAAGATGATGTTATGGTTAAGGCCTTAAAGCCGTCGTCTGCTGAGGATCTTGCGGCCAAAGTGCTTGGTTCTTTCACCAACGCACTCTCTCTCTTCAACAACAATCATCATCATGTGCTTGCAGATTCCTCTACTTCTTCTTTTTCTCACTTGCCTGCTTACTCTGATGATTCTCACGAGAGCCCTAAGATCTCTAAGAGAAGAAGCACCACTACCAACATTAAAGATCGAAGAACATGCTCTCACAAGAAAAGATGCACTCATAAGTATGAGCAAGGTTGCGAAGCAACAAAACAAGTTCAACAAATCCAAGACGATCCTCCTCTCTATAGAATCACTTATTTTGGCCACCACACTTGCACCAAGTACCTCAATCCTCAGATCTTTCTTGATGATTCTCATGACCTTAATTCAACCTCTGCTTGTATTCTCAGATTCGACAATAATCATAATATTACCACCACCTTTGACCAAAAAGTCAAAACCCAACAACAAGACCATCTCTTTCTCTCGTCCACCTCTTTGTTTCCGTCATCTGCTAGTTCTGTCAAAAACGAGGATCAGCTCTGTCCCAACATCAACCAAGAGAAGAACATTAATTACATTAATGGTAATAGTAATGTTGTTGTTCCTTCATGTTCATCCAATGATTGCCTAATGTCTCCTTTTGGATATGGGGATGACCAAGTTGACGTGTTTGATTCTGCTGTATTTGATGATCCTCTTGTGTTTGAAGATTCCTTATTTGAGGGGTACCTAGCTAATTAA 840 0.4107 MKELERGREFVNQLRELMFRSGDEEDDVMVKALKPSSAEDLAAKVLGSFTNALSLFNNNHHHVLADSSTSSFSHLPAYSDDSHESPKISKRRSTTTNIKDRRTCSHKKRCTHKYEQGCEATKQVQQIQDDPPLYRITYFGHHTCTKYLNPQIFLDDSHDLNSTSACILRFDNNHNITTTFDQKVKTQQQDHLFLSSTSLFPSSASSVKNEDQLCPNINQEKNINYINGNSNVVVPSCSSNDCLMSPFGYGDDQVDVFDSAVFDDPLVFEDSLFEGYLAN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0259 279 SUPERFAMILY WRKY DNA-binding domain 100 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g0259 279 SMART WRKY_cls 99 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0259 279 MobiDBLite consensus disorder prediction 80 98 - -
Lele42g0259 279 MobiDBLite consensus disorder prediction 76 98 - -
Lele42g0259 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 178 IPR044810 GO:0003700
Lele42g0259 279 Gene3D WRKY domain 71 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g0259 279 Pfam WRKY DNA -binding domain 97 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0259 Lele-ChrLele42 2218612 2219908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0259 1 174 WRKY Transcription Factor Family AT3G56400 27.632 4.65e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g0259 WRKY 1.4e-08 CL0274