Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0244 ATGAGGTGTTTCTCTGTCTTGAAAAGTAAGAAGAAAATGTCTGAACAGATCATCCCTATAAAACATTTCAATCATAAAGAGCATGGAGTAGCAACCATAGTGCCTGAACCTCGAACTCATACTAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACAAGAGTGAAAACCATTCAACCTGTTAATAAAATCATGAAAAATAGAATACGAGCATTGTCTGCTCCTTCAACTCTTGATGCAGCAGAGCAAGATGCTTTGGCGTCAGTTGAGTATGAGGAACAAGAAGAGTCCAAACACCGAGCTGGATTGATGAAGGAGAAGCGTGTATCTACTTCACAACCCTTACCTCTCCCATCTCCTCAGGTTGGTGGTGCATTAAAGGCTATCAGTAGCTTTAAGTTAGGGACAGCTAGTGGTCCTCTACATGCTTCTGGTCCTCTATATGCTTCTGGACCTTTGCCACTGCCACCAACTGGTTCCCTACGAAACTTTCCATTTGAGGAAATTTCTGCTGCTTGTCATAATTTCTCTTCAGATCGATTCATGTCAGAAAGTCTTTCTTCTACCATGTATAAAGCTTCTTTTGGTGATGATGCTTCCAGTTCTAGTTCAAAAACTTTTGAAGCCACTGTCACTCGTCTTCACCCATCTACTCAGGCCTTGAAGGAGTTCATAAATGAGGTTAACATTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGTTAGGTTATCATGCTCATGAGGGTTCAGAACAGAGAATGTTGGTTTATGAAAGGCTCTTTCATGGGAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGCCCACCACTTGATTGGAATACAAGAATGAAAATTGCTTTGTGTGCTGCCCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAATGAGTTTTCTACAGCAAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCTGAAGAAGAGATTCCAAGCGGTTCACCTCTGATATCTTCTGCATTATGTGATTCAAAATTTCTCATTTCTGTCAAGAAAGATAATTGCATAAGTTCTGGCTCCGTTCAGTCTGTTCATAAACTTATTTATCTGCAGGCGGTGGGAAACCTATCAGTGGAGACACTGGAAAGACGATTGCTAACTCCAAAGAGCAACGTTTGGAGCTTTGGCATTTTTCTTTTAGAACTACTGACTGGAAGAAAGAATCTGGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGTTGGCCATTCCTAGCCGACGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGGTTTCCTTCCAAGGCAGCGAGGACAATAGCCGATATTGCACTAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAATTGTTGTTGAGCATCTGAAACTAGTACAGGATATGAAGAACTCTCTTCGGTTTCCTCTGCAAGAGCCTGCTGCAATTTCTGGAAAACAGATGTCAAGATCACCGAGTCTTAATGTCATCGTTTGTCCCCAGCCTAGAACAATTTTCTTTCCGTCACCACCACCACTGCCTTCAGGAACACAACCATCTGGTTCACCTCCAAGATGGTCTGGTGGGCCCAACTTGCTTCCCTTGCGAGGGTGTTCCTCCATGCTTTCTTTGGATGAACATCAGTTAAGCCAGAAGTCGTCTTCCTCGGCGTCTAGGAGGGTCAGTGTTGTAGGATATTGA 1779 0.4334 MRCFSVLKSKKKMSEQIIPIKHFNHKEHGVATIVPEPRTHTRSLQSAPPSFKTRVKTIQPVNKIMKNRIRALSAPSTLDAAEQDALASVEYEEQEESKHRAGLMKEKRVSTSQPLPLPSPQVGGALKAISSFKLGTASGPLHASGPLYASGPLPLPPTGSLRNFPFEEISAACHNFSSDRFMSESLSSTMYKASFGDDASSSSSKTFEATVTRLHPSTQALKEFINEVNIIASLQHPNLCKLLGYHAHEGSEQRMLVYERLFHGSLDRLLYGRSDGPPLDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSGSPLISSALCDSKFLISVKKDNCISSGSVQSVHKLIYLQAVGNLSVETLERRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKAARTIADIALRCLQKEPSERPTMRIVVEHLKLVQDMKNSLRFPLQEPAAISGKQMSRSPSLNVIVCPQPRTIFFPSPPPLPSGTQPSGSPPRWSGGPNLLPLRGCSSMLSLDEHQLSQKSSSSASRRVSVVGY 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0244 592 Pfam Protein tyrosine and serine/threonine kinase 386 489 IPR001245 GO:0004672|GO:0006468
Lele42g0244 592 Pfam Protein tyrosine and serine/threonine kinase 203 335 IPR001245 GO:0004672|GO:0006468
Lele42g0244 592 MobiDBLite consensus disorder prediction 573 592 - -
Lele42g0244 592 MobiDBLite consensus disorder prediction 91 106 - -
Lele42g0244 592 PANTHER OS01G0588500 PROTEIN-RELATED 104 493 - -
Lele42g0244 592 MobiDBLite consensus disorder prediction 534 558 - -
Lele42g0244 592 Gene3D Transferase(Phosphotransferase) domain 1 262 501 - -
Lele42g0244 592 MobiDBLite consensus disorder prediction 91 119 - -
Lele42g0244 592 ProSiteProfiles Protein kinase domain profile. 176 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0244 592 SUPERFAMILY Protein kinase-like (PK-like) 155 502 IPR011009 -
Lele42g0244 592 Gene3D Phosphorylase Kinase; domain 1 157 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0244 Lele-ChrLele42 2117356 2120120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0244 155 493 Receptor kinase-like Gene Family AT4G02010 33.824 1.08e-50 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele42g0244 PK_Tyr_Ser-Thr 7.1e-11 CL0016