LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele42g0235	ATGGGGAATTATAGGTTTAGATTATCAGATATGATCCCTAATGCTTGGTTTTACAAGCTCAGGGATATGGGGAAGAGGAAGAACCAGACATCATTGGACAAGAAGAAGAAGAAGGAATCTTTACCCTCATCGACTTCGACAACCTCAAAGACATCAAAACCAAAGCAACCCCACCAGAGCATTCCGAGAAAGTCTTACTACTTTACGAGAGAGCTTAATTATCATCAAACCGATAAAATCTACAACACTCCATCACCTCCTTCCTCTAACCCCAAAGTTTCTGTTTCAGACACCAATTTCCCAGAAACACCCAGAAAATCCTCGTCCAAACAACAGAAGAGACCTAAGAGAAGAACCACAAGAACTTCTCCGAAGCTCGTGTCTTCCTCTGTTTCTTCTGGCTGTCACTGCCGAACCACTCTCGAATCCGTTTGGACCAAGTCGGATTCCCCACCAGACAACTCATCGTCTTCGTTTGACAGCTCTGCTGAATCAGAATTCCCGGAGCGAGAGTTCAGAACAGACCGTGTCCTTCCCACTGAGTCGTCATTTGATGATGATTGCAACAGCAGCAAGCTAGAGTTTCATGAAAACGACATCGTAATCGACGTGGACAAGAATTCTATCGCAAGAAAAGATGATAAGCTTGATGGCTTGGATTCATTCTCCGAGCTGGAGCTACCTCCGATCATAACCAAGCCAACCAAATCGAAGAAAGAAACCCAATTAACCAAACCCAGAAACAGAGGACGAACATTCGAGGAACCTCGAGAACAGGGGAATCTCAAAGTCAAGATTTTGAAAGAAGATACAACTCTGAATGGAGAACAGAAGACGACCCAGGTTCGGAGATTCTCCGTCAGCTCGCCGGGAGTGAAGATTCGGGTGAATTCCCCGAGAATAAGTGGCCGGAAGATTCAGGGGTGTAGTGGCCGGAAAAGTGTGTCTTCGTCGTCAACGACGAGGACCTCCCGGAGAAGCCTTTCCCATAGCTTTGCGGTGGTGAAATCGTCGTTCAACCCACAGAAAGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCAGAGCATCCAAAGAATTAGAAGATCTTCTTGCTTGCTATCTCTCTCTGAATTCAGATGAGTATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACCCATTAG	1197	0.4528	MGNYRFRLSDMIPNAWFYKLRDMGKRKNQTSLDKKKKKESLPSSTSTTSKTSKPKQPHQSIPRKSYYFTRELNYHQTDKIYNTPSPPSSNPKVSVSDTNFPETPRKSSSKQQKRPKRRTTRTSPKLVSSSVSSGCHCRTTLESVWTKSDSPPDNSSSSFDSSAESEFPEREFRTDRVLPTESSFDDDCNSSKLEFHENDIVIDVDKNSIARKDDKLDGLDSFSELELPPIITKPTKSKKETQLTKPRNRGRTFEEPREQGNLKVKILKEDTTLNGEQKTTQVRRFSVSSPGVKIRVNSPRISGRKIQGCSGRKSVSSSSTTRTSRRSLSHSFAVVKSSFNPQKDFRESMVEMIVENNIRASKELEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDTH	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele42g0235	398	ProSiteProfiles	OVATE domain profile.	334	393	IPR006458	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	42	63	-	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	70	106	-	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	234	257	-	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	22	41	-	-
	Lele42g0235	398	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	53	395	IPR038933	GO:0045892
	Lele42g0235	398	Pfam	Transcriptional repressor, ovate	338	394	IPR006458	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	22	173	-	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	122	163	-	-
	Lele42g0235	398	Pfam	DNA-binding domain	1	42	IPR025830	GO:0003677
	Lele42g0235	398	TIGRFAM	A_thal_3678: uncharacterized plant-specific domain TIGR01568	332	395	IPR006458	-
	Lele42g0235	398	MobiDBLite	consensus disorder prediction	238	257	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele42g0235	Lele-ChrLele42	2014128	2015324	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	OFP	Lele42g0235		Ovate	3.8e-24	No_clan