Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0233 ATGTTTCAGGCTATTCGAGAAATTAACAGGAATATTAGCGACGAGGAAAGAGTAGAATCTACTTCTCCGACCAGAGAAGGGGAACTCGAGGGTGTTTTGCTCGGAAAATACAAAATTCGCAGGTTTCTCGGCGTCGGAGGTTTTGCTAAGGTTTACGAAGCTTGCGATGTTGTTACGACGCAGATTGTGGCCATTAAGGTTGTGAGCAAGCGTAGGATAGCGGAGGCCCGCCATACGGCGCAGATTCAGAGGGAAATAGCTATTATGCGCCGGCTGAATCATCCCCATATCGTGAAACTCTACGAAGTCCTCGCCACCAAAACTAAGATTTACCTCGTTATGGAATGTGCGGGAGGCGGCGAGCTCTTCGACAGACTCCGTGATCACGGCCTCTTTGACGAAGATCACAGCCGTCGGTGCTTTCATCAGTTAATCTCAGCCGTCCAACATTGCCATTCTCACGGCGTGTTTCACCGCGATTTGAAGCTTGATAACCTCCTGCTCGACGAGGATTTGAACATCAAGGTTTCGGACTTCGGGTTGAGCGCCACCACGGAACAGATCCGACCCGACGGCATGCTTCATACCCTCTGTGGGACCCCCTCATACTTGTGCCCCGAGATGCTCGCCAAGAAAGGCTACGACGGAGAGCAAGTCGATGTGTGGCAGTGCGGCGTCGTTTTGTACGTGCTCACCACCGGGTTTTTGCCCTTCGACTGCCCCAACATCCCGACGCAGTTGAGGAGAATTTACCGTGGCGAGGTTCGCATACCCCGATGGGTTAAACCCGATTTGAGGCTGTTAATCAAACGGTTGCTAGACCCGAACCCGGAAACGAGGATCACCATCGATGAGATTCTGGAAGACCCGTGGTTCAGAAAAGGATACAGAGATATAAAAGTCGAGCAGAAGAATCCAGAATGGGAGGATGATGGTAGAATCAAGTCCTTGAACGCCTTCCATTTGATATCGTTCTCTTCGGGTTTGGACATGTCCGGCTTGTTCGTTACCGACCCGGAGCCGGAAGTTTCGGGCAGTGTGGAACGCATCGTTTCGAAGGAGACTCCGAAGAGGATCGTGGAGATGGTAGAGGCGGTGGCTGATCGGGACATAGTGACGGTGACCAGAAAGGAGGACGGATGGGGAGTGAAGCTTGAGGGGCATAGTGGTAATTTCCTGGTACTGATTGGTGTTTACCGGTTAACGGATGAACTGGTTGTGATTGAGGTGAAGAAGAAGGAAAAAGATAATGAAATTGGAGCAGAATTCTGGAACGATAAATTGAGGCCTCGAATTTTAGAACTAGAGCATAAATCGGAATAG 1323 0.5049 MFQAIREINRNISDEERVESTSPTREGELEGVLLGKYKIRRFLGVGGFAKVYEACDVVTTQIVAIKVVSKRRIAEARHTAQIQREIAIMRRLNHPHIVKLYEVLATKTKIYLVMECAGGGELFDRLRDHGLFDEDHSRRCFHQLISAVQHCHSHGVFHRDLKLDNLLLDEDLNIKVSDFGLSATTEQIRPDGMLHTLCGTPSYLCPEMLAKKGYDGEQVDVWQCGVVLYVLTTGFLPFDCPNIPTQLRRIYRGEVRIPRWVKPDLRLLIKRLLDPNPETRITIDEILEDPWFRKGYRDIKVEQKNPEWEDDGRIKSLNAFHLISFSSGLDMSGLFVTDPEPEVSGSVERIVSKETPKRIVEMVEAVADRDIVTVTRKEDGWGVKLEGHSGNFLVLIGVYRLTDELVVIEVKKKEKDNEIGAEFWNDKLRPRILELEHKSE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0233 440 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Lele42g0233 440 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Lele42g0233 440 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0233 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 31 413 - -
Lele42g0233 440 Gene3D Transferase(Phosphotransferase) domain 1 123 315 - -
Lele42g0233 440 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0233 440 SUPERFAMILY Protein kinase-like (PK-like) 33 305 IPR011009 -
Lele42g0233 440 FunFam Aurora kinase A 30 120 - -
Lele42g0233 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lele42g0233 440 Pfam NAF domain 315 373 IPR004041 GO:0007165
Lele42g0233 440 Gene3D Kinase associated domain 1, KA1 316 436 - -
Lele42g0233 440 Gene3D Phosphorylase Kinase; domain 1 31 122 - -
Lele42g0233 440 FunFam Maternal embryonic leucine zipper kinase 30 338 - -
Lele42g0233 440 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0233 440 CDD CIPK_C 318 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0233 Lele-ChrLele42 1974595 1975917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0233 27 435 CBL-interacting serine-threonine protein kinases AT2G30360 51.675 1.68e-151 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele42g0233 Pkinase 2.6e-70 CL0016