Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0230 ATGTGCTTGGAAGTCAAAGTTTCTTTCTCTGATGTTAACAAAGCGAGAGCTCATTTTGAGCTGCCCTTGTTCATCTTTGAAGAGATTGGATCTTTAAATCATTGTCCATGTCTATTCCGTGCTCAAGTGCATGAGGTTGCTATAAATCCAAGTGGTCATTTGATGTCAAAATATGATCTCTGCGAAGATGGTGTGCTTATGCAACGGTATGAACTGGGGAGATTATTAGGCCAAGGAACCTTTGCAAAGGTCTATTATGCAAGGAACCTTGTTACTGGCATGAGTGTGGCCATTAAGATGATTGATAAAGAGAAGATTTTGAAAGTTGGGATGATTGATCAAATTAAGAGGGAAATTTCAGTGATGAGACTAGTTAGACATCCACATGTGGTTGAGCTTTATGAGGTAATGGCCACTAAAACTAAGATTTACTTTGTCATGGAGTATGCAAAGGGTGGTGAACTCTTCCACAAGGTAGCCAAAGGAAAGCTGAAGGAGGATGTTGCCAGGAAATACTTTCAGCAACTGATCAGTGCTGTCGACTACTGCCACAGTAGAGGAGTGTGTCATCGGGATCTAAAACCAGAAAATCTGCTATTAGACGAAAATGGGAATTTGAAGGTTTCAGATTTTGGGTTAAGTGCTCTTGCTGAGACTAAGCACCAGGATGGCTTACTCCATACTACATGTGGTACCCCAGCCTATGTTGCTCCAGAAGTGATAAACAGACAAGGATATGATGGGGCCAAAGCTGATATATGGTCATGTGGGGTGATCTTGTATGTTTTATTGGCTGGTTATCTTCCATTCCAAAATTCTAATCTGATGGAGATGTATAGGAAGATTGGTAAGGGGGAGTTCAAATTTCCTAACTGGTTTGCACCAGACGTACGGCGGTTGTTGTCCAAAATCTTGGATCCGAATCCAAACACCCGGATACCAATGGCCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGATTAGAGAAGAATGTTGTTCCAGAGATCAAAGAGAAAGAACTAGCTCCTTTGGATGCTGATGGTGTATTTGGAGCTTGTGAAAATAACAGTGGTCCTGTTGCAGAGACAAAACAAGAACTCACCAAACCTTGTAACATGAATGCTTTTGATATCATTTCCTTGTCTGCAGGTTTTGATTTGTCTGGTCTGTTTGAGGAGACTGATCGCCAAAAAGAGGTTCGCTTTACATCTAACAAGCCTTCCGCTATCATCATCTCTAAGTTAGAAGAAATTTGTAAGCGCCTTCGACTGAAAGTGAAGAAGAAAGAAGGAGGTTTGTTCAAGTTGGAGGGCTCCAACGAAGGCAGAAAAGGCGCTTTGGGTATTGACGCCGAAATCTTTGAGATCACCCCACTCTTCCATATGGTGGAGCTTAAGAAGTCAAATGGCGATACATTGGAGTACCAGAAGCTTCTGAAAGAGGACATTAGACCAGCACTTAAAGACATAGTTTGGACATGGCAAGGAGAACAACCTCAACAACTCCAACAAGAAGCGGTGCTGACAGACCAACAGCCTTCACTTGCCGCCTAG 1554 0.4221 MCLEVKVSFSDVNKARAHFELPLFIFEEIGSLNHCPCLFRAQVHEVAINPSGHLMSKYDLCEDGVLMQRYELGRLLGQGTFAKVYYARNLVTGMSVAIKMIDKEKILKVGMIDQIKREISVMRLVRHPHVVELYEVMATKTKIYFVMEYAKGGELFHKVAKGKLKEDVARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRQGYDGAKADIWSCGVILYVLLAGYLPFQNSNLMEMYRKIGKGEFKFPNWFAPDVRRLLSKILDPNPNTRIPMAKIMESSWFKKGLEKNVVPEIKEKELAPLDADGVFGACENNSGPVAETKQELTKPCNMNAFDIISLSAGFDLSGLFEETDRQKEVRFTSNKPSAIIISKLEEICKRLRLKVKKKEGGLFKLEGSNEGRKGALGIDAEIFEITPLFHMVELKKSNGDTLEYQKLLKEDIRPALKDIVWTWQGEQPQQLQQEAVLTDQQPSLAA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0230 517 FunFam Non-specific serine/threonine protein kinase 61 347 - -
Lele42g0230 517 FunFam Non-specific serine/threonine protein kinase 368 492 - -
Lele42g0230 517 SMART serkin_6 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0230 517 ProSiteProfiles Protein kinase domain profile. 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0230 517 ProSiteProfiles NAF domain profile. 368 392 IPR018451 GO:0007165
Lele42g0230 517 CDD CIPK_C 374 488 - -
Lele42g0230 517 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 60 489 - -
Lele42g0230 517 FunFam Non-specific serine/threonine protein kinase 62 149 - -
Lele42g0230 517 Gene3D Transferase(Phosphotransferase) domain 1 150 330 - -
Lele42g0230 517 Gene3D Kinase associated domain 1, KA1 368 493 - -
Lele42g0230 517 SUPERFAMILY Protein kinase-like (PK-like) 66 334 IPR011009 -
Lele42g0230 517 Pfam Protein kinase domain 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0230 517 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Lele42g0230 517 Gene3D Phosphorylase Kinase; domain 1 61 149 - -
Lele42g0230 517 CDD STKc_SnRK3 69 323 - -
Lele42g0230 517 Pfam NAF domain 370 428 IPR004041 GO:0007165
Lele42g0230 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0230 Lele-ChrLele42 1942950 1944624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0230 65 500 CBL-interacting serine-threonine protein kinases AT5G58380 69.042 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele42g0230 Pkinase 7.7e-76 CL0016