Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0225 ATGGCCTCACGTGGGTATTTCTGCATGGTTCTTCTTGTGTTGGTAGTATTATCAGCTTTTGCGAACTCAGCTCGTGATTCTGTTGTTGCACTAGGGGGGCCAACATGGGAGGTGAACCTGGGGAGAAGAGACTCGACCAACGCGAGCCGAGAGGATGCAAACAATAACATACCAGCACCATTCTTTGATTTGCCTCAGCTCATAGACGGCTTCAACAAGCAAGGCCTTGACCAAAATGACTTGGTCCTTCTATCTGGTGCTCACACTATTGGATCCGCTCGCTGTGTTGCTTTTAGAAACCGCATCTACAACGGCTCCAACATCAATCCCTTCTTTGCTGCACAACTCCAAACTGTGTGCCCTAGAAGTGGAGGTGACGAAAACCTTGCATCGTTGGACTCATCCCCTGCAAACTTCGACGTGTCTTTCTTTTGGAATTTGGTTAAGAAGAAAGGGCTTATTCATTCTAATCAAGCTCTCTTCAGTGGCTGTTCTACTGATGCATTGGTCATGCAGTATACCCTAAATCCTCAAGCTTTCTTCGAGGGTTTTGCTTCTTCCATGATTAAGATGGGAAATTTAAAGCCACTCACTGGGAATCAAGACCAGATCCGTGTAAATTGCAGAAGCGTCAACTGA 639 0.4632 MASRGYFCMVLLVLVVLSAFANSARDSVVALGGPTWEVNLGRRDSTNASREDANNNIPAPFFDLPQLIDGFNKQGLDQNDLVLLSGAHTIGSARCVAFRNRIYNGSNINPFFAAQLQTVCPRSGGDENLASLDSSPANFDVSFFWNLVKKKGLIHSNQALFSGCSTDALVMQYTLNPQAFFEGFASSMIKMGNLKPLTGNQDQIRVNCRSVN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0225 212 Gene3D Peroxidase, domain 2 58 191 - -
Lele42g0225 212 Gene3D - 21 212 - -
Lele42g0225 212 SUPERFAMILY Heme-dependent peroxidases 21 212 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 FunFam Peroxidase 58 191 - -
Lele42g0225 212 ProSiteProfiles Plant heme peroxidase family profile. 20 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Plant peroxidase signature 79 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Plant peroxidase signature 146 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Plant peroxidase signature 32 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Plant peroxidase signature 186 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Haem peroxidase superfamily signature 80 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Haem peroxidase superfamily signature 32 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 PRINTS Haem peroxidase superfamily signature 132 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 ProSitePatterns Peroxidases proximal heme-ligand signature. 80 90 IPR019793 -
Lele42g0225 212 PANTHER PEROXIDASE 72-RELATED 21 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele42g0225 212 Pfam Peroxidase 23 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0225 Lele-ChrLele42 1895511 1897413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0225 20 212 Peroxidase AT5G05340 53.061 5.90e-66 204