Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0223 ATGTATGGGTACAAGCTAAGAAGCGGTGGAAGACGAAGTCCGGCAGCCGTCGATCTCTCTGACCTCTTCTTCAGGTTTTCTACTTTTGAATTCAGAGGGATCTGGTGTTTCGGAGTTATGGCTATCGCGGCCCCTGGGCAGCTGAACCTTACCGAGTACCCTTCATGGGGATCCAGAAGTGTTGATTGTTTTGAAAAGTTGGAGCAGATTGGCGAGGGAACTTATGGTCAAGTTTACATGGCTAGAGAAATCAAAACAGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCCATTACTGCTATACGGGAAATCAAAATTTTAAAGAAATTACACCATGAAAATGTTATTAAGCTGAGAGAGATAGTGACATCACCAGGCCCTGAGAAAGATGAGCAAGGGAAGCCAGATGGTAACAAATATAAAGGTGGTATCTACATGGTGTTTGAATACATGGACCATGATTTGACTGGTCTTGCTGATCGACCTGGGATGAGATTTACAGTTCCTCAAATCAAGTGTTATATGAGACAGCTTTTGACGGGGCTTCATTATTGTCATGTGAATCAAGTACTTCATCGTGATATAAAAGGATCCAATCTTCTTATAGACAATGAGGGTAATCTGAAGCTTGCCGATTTTGGACTTGCACGATCATTTTCTAATGACATCAATGCAAATCTCACAAATCGTGTTATCACATTGTGGTACAGACCTCCAGAGCTGCTGCTAGGAACAACAAAGTACGGGCCTGCTGTTGATATGTGGTCTGTTGGATGCATCTTTGCTGAGCTTCTTCATGGCAAGCCTATTTTCCCTGGAAAAGATGAGCCAGAACAACTAAACAAAATTTTTGAGCTGTGTGGAGCACCAGATGAGGTGAACTGGCCTGGGGTTTCTAAGACTCAATGGTATAATCAATTTAAGCCAACAAGACCAATGAAAAGACGCCTGAGAGAATTTTTCAGACATTTTGATCGTCATGCTTTAGAATTGTTGGAGAGGATGCTGGCACTTGATCCTGCCCAGAGAATTACTGCTAAGGATGCACTTGATGCTGAGTATTTCTGGACTGATCCATTGCCATGTGATCCAAAGAGTTTACCCAAATACGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGCCAGCAACAACGACAACATGAAGAGAATGCTAAACGTCAGAAAATGCTGCACCCCCAGCAACACAATCGTCTTCCCCCTACTCAGCAATCAGGGCAACCACATGCTCAGATGTGGCCAGGTCCAAACCCAACAATGCATGGCCCGCAGCCCACAGTGGCTGCAGGGCCTGGCCACCATTATGGGAAGCCTCGAGGTGCCTCTGGTGGGCCAGGAAGATACCCTCCAGGTGGGAACCCTGGTGGGGGATACAATCACCCAAACCGTGGTGCAGGTCAAGGTGGTGGAGGTGGGGGTTATGGCAGTGGGCCATATCCTCCTCAAGGCCGGGGAGCCCCTTATGGGTCAAGTGGTATGCCCGGCGGTGGTCCTCGTGGTGGCAGCGGCAGCGGCTATGGAGTTGGAGCACCACCAAATTATCCTCAAGGCGGTCCATATAGTGGATCAGGAGCTGGCCGTGGTTCAAACGTGATGAGTGGAAATCGCAATCAACAGTATGGTTGGCAGCAGTAA 1680 0.469 MYGYKLRSGGRRSPAAVDLSDLFFRFSTFEFRGIWCFGVMAIAAPGQLNLTEYPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLREIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDINANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTQWYNQFKPTRPMKRRLREFFRHFDRHALELLERMLALDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKMLHPQQHNRLPPTQQSGQPHAQMWPGPNPTMHGPQPTVAAGPGHHYGKPRGASGGPGRYPPGGNPGGGYNHPNRGAGQGGGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGSGSGYGVGAPPNYPQGGPYSGSGAGRGSNVMSGNRNQQYGWQQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0223 559 Gene3D Transferase(Phosphotransferase) domain 1 161 403 - -
Lele42g0223 559 MobiDBLite consensus disorder prediction 376 405 - -
Lele42g0223 559 MobiDBLite consensus disorder prediction 410 427 - -
Lele42g0223 559 ProSiteProfiles Protein kinase domain profile. 64 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0223 559 MobiDBLite consensus disorder prediction 541 559 - -
Lele42g0223 559 FunFam Cyclin-dependent kinase C-2 161 403 - -
Lele42g0223 559 CDD STKc_CDK9_like 64 363 - -
Lele42g0223 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lele42g0223 559 Pfam Protein kinase domain 64 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0223 559 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Lele42g0223 559 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Lele42g0223 559 FunFam Cyclin-dependent kinase C-2 51 160 - -
Lele42g0223 559 PANTHER CELL DIVISION PROTEIN KINASE 62 369 - -
Lele42g0223 559 SUPERFAMILY Protein kinase-like (PK-like) 57 371 IPR011009 -
Lele42g0223 559 MobiDBLite consensus disorder prediction 374 559 - -
Lele42g0223 559 SMART serkin_6 64 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0223 Lele-ChrLele42 1875136 1887550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0223 40 559 Core Cell Cycle Gene Families AT5G10270 77.757 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele42g0223 Pkinase 1.9e-73 CL0016