Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0204 ATGGAGAGCGGTGCGGAGAAAGAGGCTAATAGTCGAGTGCCGCTTTCGGATGTGGTAGCGGATTGTGTTAAGCGGTGGTTTAGGGACACGCTTAAGGAGGCCAAAGCAGGTGACATCAACATGCAAGTGCTGGTTGGTCAGATGTATTGCAGCGGTTATGGAGTTTCTAGAGATGCCCAGAAGGGAAGAATTTGGCTTACCAAGGCATCAAGGACTAGATCTTCAGTTTGGAAAGTTGGTGATAAGCGCCCAGGTGAACACTCCCTTCCTTGTTATCACCGTTATAATGCGAGTGATTCTGATTCTGATGAATTGAAGGAAGATTCTTAA 330 0.4697 MESGAEKEANSRVPLSDVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYCSGYGVSRDAQKGRIWLTKASRTRSSVWKVGDKRPGEHSLPCYHRYNASDSDSDELKEDS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0204 109 Gene3D Tetratricopeptide repeat domain 8 96 IPR011990 GO:0005515
Lele42g0204 109 SUPERFAMILY HCP-like 32 70 - -
Lele42g0204 109 PANTHER EXPRESSED PROTEIN 1 108 - -
Lele42g0204 109 MobiDBLite consensus disorder prediction 77 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0204 Lele-ChrLele42 1681083 1681991 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0204 42 1681083 1681991 Lele37g1384 37 22621594 22623799 CCT
Lele42g0204 42 1681083 1681991 Lele39g0041 39 307259 312343 CCT
Lele37g1423 37 22907997 22920727 Lele42g0204 42 1681083 1681991 CCT
Lele42g0204 42 1681083 1681991 Lele42g0204 42 1681083 1681991 ECH
Lele42g0204 42 1681083 1681991 Lele43g1152 43 19902263 19903192 hybridization
Lele42g0204 42 1681083 1681991 Lele44g1143 44 20054743 20055650 hybridization