Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0200 ATGTCGAAGGTTCCCGACTCACCGACCAAGACGAATTTGGATTCTTCTCCGGCCGACCAGAAGCCGGCGTCGCCTTTACCGGATTTAGAGCAACAAACGCAGCCGCATGTGGACGGTGGAGTCGGCGGAATATTAAGGCGATGGAAGAGGGACGATTTATTGAAGAGAGGTTCGTTGGTATTGAGAGGGATTGCCCTGGTTTGCTCTTTGATCAGTTTCATCGTCATGGCCTCCAATAAGCATGGCGATTGGAAAAATTTCGATAGATACGAGGAATATAGGTATGTTCTGGCAATATCGATTATGTCGACGCTGTACACCGGCGGCCAAGTGTTCCGGCAAGTTAAGGAAAACTCCTCCGGAAAGAATTTTCTGCAGCCAAGAACAGCTCTGTTGTTGGACTTCATTGGAGATCAGATAATGGCATATTTGTTGATCTCATCAGCTTCTTCAGCAGTTCCATTGACAAACAGCATGAGGGAAGGATCTGACAATATATTCACAGACACTTCTGCTGCAGCCATCAGCTTCTCCTTCTTGGCCTTCTTTGCTGCTGCTGCTTCCTCCCTTCTTTCTGGCTACAAGTTATCAACTCAATCCTACATCTGA 609 0.4729 MSKVPDSPTKTNLDSSPADQKPASPLPDLEQQTQPHVDGGVGGILRRWKRDDLLKRGSLVLRGIALVCSLISFIVMASNKHGDWKNFDRYEEYRYVLAISIMSTLYTGGQVFRQVKENSSGKNFLQPRTALLLDFIGDQIMAYLLISSASSAVPLTNSMREGSDNIFTDTSAAAISFSFLAFFAAAASSLLSGYKLSTQSYI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0200 202 MobiDBLite consensus disorder prediction 1 19 - -
Lele42g0200 202 Pfam Casparian strip membrane protein domain 54 184 IPR006702 -
Lele42g0200 202 MobiDBLite consensus disorder prediction 1 41 - -
Lele42g0200 202 PANTHER CASP-LIKE PROTEIN 4A4 26 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0200 Lele-ChrLele42 1648110 1650110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0200 42 1648110 1650110 Lele42g0200 42 1648110 1650110 ECH
Lele42g0200 42 1648110 1650110 Lele43g1156 43 19940054 19942053 hybridization
Lele42g0200 42 1648110 1650110 Lele44g1146 44 20091450 20093554 hybridization