Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0184 ATGTTACCTTGTGGGCGAGCGATTGGTACAAAGGTTGAAGGCAGGTCTCTTTACAGAAACACTGAATGGATCGTTTTGAATGTATCTCTGTTTTCTTCTTGTCCTGGTATGATTATCAATTTTGAGAATTCTAAAGAGAGTTGTATTATGGGTGGTGACTGTAGGAACAAGACATCGCGTAAGAGAAGAAGAAGCTGGAGTGACACTGTGATAGACACTCTAGAGAAGTGGAAGAAGTACAATAGTGAGTCTGAGTTTGTCAAAAATGGTGGAGCAAATAAAGCGATGAGTCACAGAGTTCCTGCAAAAGGCTCGAGAAAGGGGTGCATGCGAGGCAAAGGTGGGCCTCAAAACTCAGATTGCAACTACAGAGGAGTGAGACAGAGGATTTGGGGCAAATGGGTGGCAGAAATTCGTGAACCCATTACTGGAAATCACAGTAATGTGGCAAACAAGAAAACGAATCGCTTATGGCTCGGCACTTTCTCTACTGAACTGGAAGCTGCTCTTGCTTATGATGAAGCAGCCAGAGCCATGTATGGTCCTTGTGCTCGCCTGAACTTTCCTGATTATAATATGGAAGGAGGAGGAGGAGAAGAAGAACCCACAATCTCTAATGAGGAAACAGAGAAGAAACATGAGGTTGTTCTGGTGAAGACAGAGGAAGAAACAGAGGAGGACTCTGGTGTCATTGGAAGTGAAGGTTCCTTTGGGAAGAAGCAGATGGAGGAAATGACTTCTGAGATTCTACGATTTTGTACATCTGATCACTCCCAAAGTGAGGAATATAGATCTTCTATAGAGAGGAAATTTGAAGATGAGGAGGGTTTGAACAATTCTGGTTCTAGTAATGGAAACTCCATGTTTGAAGAAAAAGAAAGTGATGAGTGGCAGAGTGGTCATTTGCCTGAGTATCTGAATAACATGAAGGAGGCAGACTTGGAAGTGGGTTATTATGACTACAGTTTCTTGAGACCTGATTATGACTTTGGCTTATGGGAAGAGAAAAACTTACTTGGCATATGGTTTCCACACATGGCTTCTTAG 1047 0.4269 MLPCGRAIGTKVEGRSLYRNTEWIVLNVSLFSSCPGMIINFENSKESCIMGGDCRNKTSRKRRRSWSDTVIDTLEKWKKYNSESEFVKNGGANKAMSHRVPAKGSRKGCMRGKGGPQNSDCNYRGVRQRIWGKWVAEIREPITGNHSNVANKKTNRLWLGTFSTELEAALAYDEAARAMYGPCARLNFPDYNMEGGGGEEEPTISNEETEKKHEVVLVKTEEETEEDSGVIGSEGSFGKKQMEEMTSEILRFCTSDHSQSEEYRSSIERKFEDEEGLNNSGSSNGNSMFEEKESDEWQSGHLPEYLNNMKEADLEVGYYDYSFLRPDYDFGLWEEKNLLGIWFPHMAS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0184 348 MobiDBLite consensus disorder prediction 94 116 - -
Lele42g0184 348 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 56 296 - -
Lele42g0184 348 CDD AP2 121 190 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 MobiDBLite consensus disorder prediction 263 298 - -
Lele42g0184 348 ProSiteProfiles AP2/ERF domain profile. 122 189 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 Pfam AP2 domain 121 181 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 SMART rav1_2 122 195 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 FunFam Ethylene-responsive transcription factor 2 121 190 - -
Lele42g0184 348 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lele42g0184 348 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Lele42g0184 348 SUPERFAMILY DNA-binding domain 122 190 IPR016177 GO:0003677
Lele42g0184 348 Gene3D AP2/ERF domain 122 190 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0184 Lele-ChrLele42 1526123 1530538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0184 58 255 AP2-EREBP Transcription Factor Family AT2G40340 44.500 1.67e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele42g0184 AP2 9.5e-14 CL0081