Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0183 ATGGGAAACCATAATCGGTTTGCCGAGAAGTTTCCCAGAAATGAAGGAAGAAGACCCATTTCTCGTTTCTTCGTCTCCTTCATTCTGGTTCTTCTTCAAGTTCTGGCATTTACGTTTCAACCAGCCTCAGGAGGAGGAGGCCATGCGTGGGATGGTGTGATTGTTGAGCAAGCTGATTACCAGGCTCTGCGAGCTATAAAGCAAGAATTCATCGATTCCAGAGGAGTTCTGAGGAGCTGGAATGACAGTGGAATTGGAGTTTGTTCTGGTGGATGGGCAGGAATAAAGTGTGTGAAGGGACAGGTTATTGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTCGAATTTCCGAGAAAATAGGAACGCTTCAATCTCTTAGGAAATTGAGTCTACACGACAATGTATTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAATCTACCTCTTCAACAATAGGCTTTCAGGTTCTGTTCCTCCTTCCATTGGCAGGATTAGCCCAATGCTTCAGTCTATTGATCTTAGCAACAATTCTCTCTCAGGTACTATTCCTCCTAGCTTAGCAAACTCTACTAGATTATATAGACTCAATTTGAGCTTTAACTCTTTTTCTGGGTCTATTCCTAGAACTTTCACTATGGCTCCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCTTGGGTTAGTGAAATGGGAAAAAACCAATCTTACCAACTTCAAATCTTGACCCTTGATCACAATCTCATTTCTGGAACCATTCCTGTTTCTTTGAGTAAGATGGGTCCTCTCCAAGAGATTTCTCTGAGCCATAACCGGATTAAAGGGTCTATTCCAAGTGAACTAGCTGGGCTTTCTAGGCTTCAAACTCTTGATCTATCAAGCAATGGCATTAATGGTAGCTTTCCAGATAACTTTGACCGGTTAAAAAGCCTTATTGTGCTTAACCTGAAAAATAATAAGCTTGAGGGTGAAATCCCATCAACAATTGGGAACATCTCAGGAATCACCCAGATTGATTTCTCTGATAATAAACTTGTGGGGGAGATTCCAGATTCACTTACCAAACTTGCAAATTTGACCTCTTTTAATGTTTCTTACAACAATCTCTCTGGCCTTGTCCCAACCTTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCAGGGAATCTCCAACTCTGTGGGTATATCCCTTCAAAACCATGCCCTTCTTCTTCGCCCCTATCTCACAATCCTCCATCTCCATCCCCAAAACCTTCATTGAACCCACACCATCGTAAACTAAGCACCAAGGACATAATCCTCATAGTTGCAGGGGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCCTTTTGCTTTGTTGTTTGATCAGGAAAAGAGCAGCATCTAAAGAAAAGAATGTGAATAGTGGCAAAACATTGGCTGCTGCTAGCACTACAAGAAGTGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGCGAAGCAGGAGGGAAGCTAGTTCACTTTGATGGACCATTTGTTTTTACAGCTGATGATCTCTTGTGTGCTACTGCTGAGATTATGGGAAAAAGTGCTTATGGAACAGCGTACAAGGCAACATTAGAGGATGGGAACCAGGTTGCTGTGAAGAGGTTGAGGGAGAAGACAACCAAAGGACAGAAGGAGTTTGAAACTGAGGTTGCTTCACTTGGCAAAATTAGACACCCAAATCTGTTAGCACTTAGAGCTTACTATTTGGGGCCAAAGGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGTCTAGCATCATTCCTCCACGCTCGGGGCCCAGAAATTGTCATAGACTGGCCAACAAGGATGAGAATAGCCCTTGGAGTGACACGTGGCCTATGTTACCTGCATACACAAGAGAACATAGTACATGGGAATCTCACCTCAAGCAATGTACTCTTGGATGAGCAGACAAATGCCCATATCACAGACTTTGGTCTCTCAAGGCTAATGACCACGTCAGCAAACAGCAACATCATAGCCACTGCAGGAAACCTCGGATACAATGCCCCAGAGCTCACAAAGACCAAGAAACCAAACACAAAAACTGATGTCTATAGCCTTGGTGTCATCATTTTGGAGCTTTTAACTGGAAAACCACCTGGTGAACCTACCAATGGCTTGGATTTGCCACAGTGGGTTGCTTCAATAGTGAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATAGGCGATGAACTGCTTAATACTCTGAAATTAGCCCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTGGAAGAGATCAGGCCAGATTCTTCTTCAGTGGATGATGGAGCAAAAGTCCCAGAAACTACCGAGTAA 2454 0.4356 MGNHNRFAEKFPRNEGRRPISRFFVSFILVLLQVLAFTFQPASGGGGHAWDGVIVEQADYQALRAIKQEFIDSRGVLRSWNDSGIGVCSGGWAGIKCVKGQVIAIQLPWRGLGGRISEKIGTLQSLRKLSLHDNVLGGPVPWSLGFLPNLRGIYLFNNRLSGSVPPSIGRISPMLQSIDLSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPRTFTMAPSLTILALQHNNLSGSIPDSWVSEMGKNQSYQLQILTLDHNLISGTIPVSLSKMGPLQEISLSHNRIKGSIPSELAGLSRLQTLDLSSNGINGSFPDNFDRLKSLIVLNLKNNKLEGEIPSTIGNISGITQIDFSDNKLVGEIPDSLTKLANLTSFNVSYNNLSGLVPTFLSKRFNSSSFAGNLQLCGYIPSKPCPSSSPLSHNPPSPSPKPSLNPHHRKLSTKDIILIVAGALLVILLLLCCLLLCCLIRKRAASKEKNVNSGKTLAAASTTRSAGKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTQENIVHGNLTSSNVLLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIRPDSSSVDDGAKVPETTE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0183 817 MobiDBLite consensus disorder prediction 796 817 - -
Lele42g0183 817 FunFam Leucine-rich repeat receptor-like protein kinase 514 604 - -
Lele42g0183 817 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 246 419 - -
Lele42g0183 817 Pfam Leucine rich repeat N-terminal domain 57 97 IPR013210 -
Lele42g0183 817 Gene3D Phosphorylase Kinase; domain 1 534 605 - -
Lele42g0183 817 Gene3D Ribonuclease Inhibitor 58 174 IPR032675 -
Lele42g0183 817 Gene3D Ribonuclease Inhibitor 175 247 IPR032675 -
Lele42g0183 817 Pfam Protein tyrosine and serine/threonine kinase 532 796 IPR001245 GO:0004672|GO:0006468
Lele42g0183 817 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 56 245 - -
Lele42g0183 817 FunFam Pollen receptor-like kinase 1 605 810 - -
Lele42g0183 817 Gene3D Transferase(Phosphotransferase) domain 1 606 812 - -
Lele42g0183 817 SMART LRR_typ_2 370 393 IPR003591 -
Lele42g0183 817 SMART LRR_typ_2 298 321 IPR003591 -
Lele42g0183 817 SMART LRR_typ_2 322 346 IPR003591 -
Lele42g0183 817 SMART LRR_typ_2 274 297 IPR003591 -
Lele42g0183 817 SMART LRR_typ_2 147 171 IPR003591 -
Lele42g0183 817 PRINTS Leucine-rich repeat signature 298 311 - -
Lele42g0183 817 PRINTS Leucine-rich repeat signature 175 188 - -
Lele42g0183 817 Gene3D Ribonuclease Inhibitor 251 312 IPR032675 -
Lele42g0183 817 SUPERFAMILY L domain-like 96 407 - -
Lele42g0183 817 Gene3D Ribonuclease Inhibitor 313 418 IPR032675 -
Lele42g0183 817 SUPERFAMILY Protein kinase-like (PK-like) 532 801 IPR011009 -
Lele42g0183 817 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Lele42g0183 817 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Lele42g0183 817 CDD STKc_IRAK 534 799 - -
Lele42g0183 817 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 248 799 - -
Lele42g0183 817 MobiDBLite consensus disorder prediction 481 503 - -
Lele42g0183 817 ProSiteProfiles Protein kinase domain profile. 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0183 Lele-ChrLele42 1521874 1525096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0183 48 801 Receptor kinase-like Gene Family AT3G51740 66.837 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele42g0183 PK_Tyr_Ser-Thr 1.4e-40 CL0016