Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0179 ATGCAGAAAAGGCGAAGAGATTGTCTCATATTTGTGGGCATAGTATGCCTAATTCCCTTAACTGAGTCTGCAACTGTAGAAATACCAGTAGGAGTGATGCTGGATTTGGATTCATCACTTGGTTCCATGGCTCACGACTGTATCAACATCTCACTCGAAGATTTCTATTCCACAAATGATGCCTATGAAACCAAGCTCCAACTTCATTTCAATGATTCTGGAAACGATCTCCTCACTGCAGCTTCTGCAGCTCGGGATCTAATAAATAACAAAAAGGTGCATGCAATCGTGGGACCTCAAAACTCTGAGCAAGCAAGGTATGTTGTAGAACTTGGTAACAAATCTGATGTACCTGTGATCTGGTTTTCTCCATCTGGTCCTTCTCTTTTGCCACCTCGTTCCCGATTCTTCATCCACTCCAACACCAACAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATAGAAGCTTATCATTGGCAGTCTGTGATCCCCATTTATGAATGGCCAGAATTCGGCAATGACCTAATTCCTTGTCTCACTAATGCCTTGCAAGACATGGACACTCGAGTGCCTTACGTAAGTGACATTCGTCAAGATTCCACGGATGATCAAATCAAAGCTGAGCTTAAAAAGATAAAAGGCAACCGAACATATGTGTTTGTTGCCCATATGACCGTGGAGCTTTGGTCAAGACTTGGGGAACAAGCACAAAAGGCAGGGATGATGGGTGAAGGATACGCTTGGATACTTACACAAGGCCTATCTTCTGTGGTAGATTCCGAATCTAAAGGCTACATGGAAGGTGCTTTGGGTGTGAGGCCATCTTTCGTTGTTTCCAACATAAATAAAAGTAAGCGCGATTCCTTAGCGACAACATTAATGTCAAAGTCAGATAAAACTGTGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCATTGGCCAAGGCGGTAGAGAATGCCGGCTTAGTCAATTATAATGAAAGCATAGTTGATCTTCGCAACGAAACAGGCCCAGAACTTGGCAGAGAAATTCAAGATACTGATTCCGAAGGCCTGTCGGGTGATTTCAGTTTGAGGCAAGGACAACTAGAACCATCACAATTTGCAGTATACAATGTGAAAGGGAAAAGAGAAACGATCATTGGATATTGGAGCCCCGAAACAGGACTTGTTCAAAATGACAGTGTACAAGTTGAATGGCCGGGTAACGCAAAGAAGATACCACTAAAGTTGAAAATTGGGGTCCCAAAAACGCATTTCACTGAATTTGTTGATGTTACTGGAGAAGGGCACGGTATATCAGATGTTGGTGGCTTTGCTGTTGATGTATTTAAAAAAGTGGTTGATGTTTTGCCATTTAATTTAACTTATGAGTTTGTGCCCGTGAACATTAGTGGAGAGAATATTCCCTCGAGCTATGATGCTCTTCTCTGCCATATCAAAAACAAGAATGTTGATGTTGATGTTATAATTGGAGACATTACAGTTGTAGCGAATCGCACAGATTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGCGTGTCAATGGTGGTGAAGGTGAGGTCCGACTCCAAAAATGGATGGATCCTCTTCGAACCTTTTGATGAGATACTTTGGTTAATTCTTGGTGCGATTTTCGTGGGTGCAACTGTTATTGTAATTATATTGGAAAGAAGCACGAAGGATAGCAAATTCGAAGATTTTGTCCATAATCCGTTCCTTATTTACAAGAGTGATGTAGATTCTCTGAATAGACGCACGTCTAAATGGGTGGTGATAGTGGTCATGTTTCTGTTGAGCATAGCAGTGCAAGTTTACACTGCAAATTTGACATCAATTTTTACAGAGAGGACAACGGCGAAGCCTTCTCCATGGAGGGACGTGCAAGAGATTAAAAGGAGCAATAAGTCAGTGGGATATCAAAGCGATTCCTGGGTGAGAGACTTTCTGATTCACCAAATAGGATTGAAGGATGATAAGCTAAAGCCTTATAAATGTCTTAAAGAGTACATGGATGCATTATTCAATGAAGACAAAGACAAACGAGTGGATGCCATTTTTGACGAAACTCCTTATCTCATGTTCTTGCTTAAGAAATGCAATTCTTGCAAGATGACAGGACCATTCTACAAAACTGGTGGATTTGCCTTCGCATTCCCAAACAATTCTTCCTTAGTGTCGAGTTTTTCAACTGCAATATTGAATGTGACTCAAGATGTGATGGCATTTCGTGATATGAAGAACAAAATATCCTTGCCCATCATCACTGATATATCCGAATACAAAAGTGATGTTGAGACGCGAAGTTTGACGAAAGGCGACTTTGGAGGCCTTTTCCCGATAGTATGGTCTGTTTTAGCTCTCTTCTTCGTCCTTTCAATTCTCAAACTTCCATATATCGATCGCAGGTTGCGTTCCACATCTATCTATAGCTCTCTGGATGCGTTCAAACGATCACTGTCTGCTCGTATAAGAAATTGGTTTCCTTAG 2508 0.4147 MQKRRRDCLIFVGIVCLIPLTESATVEIPVGVMLDLDSSLGSMAHDCINISLEDFYSTNDAYETKLQLHFNDSGNDLLTAASAARDLINNKKVHAIVGPQNSEQARYVVELGNKSDVPVIWFSPSGPSLLPPRSRFFIHSNTNRSHCSQFEAIAAIIEAYHWQSVIPIYEWPEFGNDLIPCLTNALQDMDTRVPYVSDIRQDSTDDQIKAELKKIKGNRTYVFVAHMTVELWSRLGEQAQKAGMMGEGYAWILTQGLSSVVDSESKGYMEGALGVRPSFVVSNINKSKRDSLATTLMSKSDKTVSLYGLWAYDTITALAKAVENAGLVNYNESIVDLRNETGPELGREIQDTDSEGLSGDFSLRQGQLEPSQFAVYNVKGKRETIIGYWSPETGLVQNDSVQVEWPGNAKKIPLKLKIGVPKTHFTEFVDVTGEGHGISDVGGFAVDVFKKVVDVLPFNLTYEFVPVNISGENIPSSYDALLCHIKNKNVDVDVIIGDITVVANRTDCVDFTMPYLDSSVSMVVKVRSDSKNGWILFEPFDEILWLILGAIFVGATVIVIILERSTKDSKFEDFVHNPFLIYKSDVDSLNRRTSKWVVIVVMFLLSIAVQVYTANLTSIFTERTTAKPSPWRDVQEIKRSNKSVGYQSDSWVRDFLIHQIGLKDDKLKPYKCLKEYMDALFNEDKDKRVDAIFDETPYLMFLLKKCNSCKMTGPFYKTGGFAFAFPNNSSLVSSFSTAILNVTQDVMAFRDMKNKISLPIITDISEYKSDVETRSLTKGDFGGLFPIVWSVLALFFVLSILKLPYIDRRLRSTSIYSSLDAFKRSLSARIRNWFP 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0179 835 Gene3D - 146 316 - -
Lele42g0179 835 SUPERFAMILY Periplasmic binding protein-like II 415 745 - -
Lele42g0179 835 Gene3D - 413 537 - -
Lele42g0179 835 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 798 - -
Lele42g0179 835 SUPERFAMILY Periplasmic binding protein-like I 28 414 IPR028082 -
Lele42g0179 835 Gene3D - 615 719 - -
Lele42g0179 835 Gene3D - 614 745 - -
Lele42g0179 835 Pfam Bacterial extracellular solute-binding proteins, family 3 442 745 IPR001638 -
Lele42g0179 835 Pfam Receptor family ligand binding region 49 380 IPR001828 -
Lele42g0179 835 SMART GluR_14 417 751 IPR001320 GO:0015276|GO:0016020
Lele42g0179 835 PIRSF IGluLR_plant 4 829 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0179 Lele-ChrLele42 1478052 1483131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0179 11 744 Ion Channels AT2G29120 36.616 4.70e-136 426