Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0177 ATGGAGTCTGAGATGCTTGATCCCTCTTGGTCGTCGTTCCGTGAAGGCATAAGCTCAACTTTTGATCAAGTTGAGTCTTTTGACTTCAACGTGGATACTCCTTTGTTCACTGACATCTTCTCCGATGATCATGTCTATTGTCCAGTTGATGACGACAACCTTCAACTCCCATCATTGATTGATGATTTCTCCTTCGATCTTGAAGCTTTTGATGCCACTTTGAATTCTCAAATTCTGGGAATCCATGGATACGCACAAAGTGAGGGAAGCTTTCCTTCACAGAACTTGTGTTTTGAGAGAGAAGATGTTTGGAGTCCAACCCCATCGATGCAATCAGACATGTCTACAGTAGTACAAGCACAGCCACCACTGATCATACCAGAAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTCTGGAAGCCATTGGAGAAGCCTTAGAGCAAGGACATAAAACACTTGCCCAGGTGATTCTTAGATGCATCAGCCACAAAGTAAGCCCTCTTGGTGATCCCCTTGAACGTCTCGCATTCAATTTGTCCCAAAATCATGAAACTACAGAGCAGGGGACTTTCATCAAACAGGAGGCGTGCAAGACCTTCCACAACGCTTTCAAGGCTATCTACCAAGGCCTGCCACATGGAAGAATTGCCCATTTTGCAGCCCATTCAGCAATTATAGGATCTATACCAGCTAATTCAGAATTCATACATATAATAGACTTTGATATGGGAGAAGGTGTTCAATGGCCTCCATTGATAAAGGCTATCGCTCAACACCACAAAACTTTGAAACTGACATCAATCCGATTGGAAGAAGAGGACACTCTTTATACTGATTGTGTTTGTACTCAATGGAAATTTGAAGAAATCAGAAGGAACCTCTACGAGCATGCCAAATCATGTGGTTTAAAGTTGAAGGTAGAAGAACAGAGTATAGAAGAATTAGTGACAGAGCTCAAGAAATTGAACAAAAGAGGTGGAAAGAGAAATTTCGTGGCCTTCAATTGCATGGTGGGTCTTCCACATATGGGTAGGATCAGAAGTAGGAGACAGGTATCGGAATTTCTACATGTAGCGAAGGATTTCATCAAAAGCTCACCTTCAAACCGGGGAATTATAACTTTTGGCGATGGAGAAGCCTGTGAGAAGCTCAGAAACAGCACCAACTTCATGTCATTCTTTACTGGCCATTTGGTGCACTACCATGCTTTGTTAGAATCCATGGAATCAAATTTCCCATTCCAATTCTCAGAGGCAAGAACAGCTATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAAGATTGGGTTCAGAAGTGGGAGGAGATGAGACAATTGGATCAGAATCTTCAATCAGAAATAGAGTTAGAGGGTCGAAGCTTGAGGGAAGAGACGTTAATGGAAGTCGGAGAAATGTTGAGAGGAATCGATGAAGGATCGTATGAGTTTAAGATTGAAGGCAATAATAGCAATGAAATGGTTTTGGAATGGAAAGGAACGCAACTTGTAAAAATTTCAACGTGGGGGAAACTATCAAATTACTGA 1560 0.4205 MESEMLDPSWSSFREGISSTFDQVESFDFNVDTPLFTDIFSDDHVYCPVDDDNLQLPSLIDDFSFDLEAFDATLNSQILGIHGYAQSEGSFPSQNLCFEREDVWSPTPSMQSDMSTVVQAQPPLIIPEEDMEMENQLSLPHLLEAIGEALEQGHKTLAQVILRCISHKVSPLGDPLERLAFNLSQNHETTEQGTFIKQEACKTFHNAFKAIYQGLPHGRIAHFAAHSAIIGSIPANSEFIHIIDFDMGEGVQWPPLIKAIAQHHKTLKLTSIRLEEEDTLYTDCVCTQWKFEEIRRNLYEHAKSCGLKLKVEEQSIEELVTELKKLNKRGGKRNFVAFNCMVGLPHMGRIRSRRQVSEFLHVAKDFIKSSPSNRGIITFGDGEACEKLRNSTNFMSFFTGHLVHYHALLESMESNFPFQFSEARTAMENLFVAPYISCEDWVQKWEEMRQLDQNLQSEIELEGRSLREETLMEVGEMLRGIDEGSYEFKIEGNNSNEMVLEWKGTQLVKISTWGKLSNY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0177 519 Pfam GRAS domain family 141 513 IPR005202 -
Lele42g0177 519 Coils Coil 309 329 - -
Lele42g0177 519 ProSiteProfiles GRAS family profile. 130 514 IPR005202 -
Lele42g0177 519 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 507 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0177 Lele-ChrLele42 1456369 1457928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0177 134 513 GRAS Transcription Factor Family AT1G66350 23.426 2.73e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele42g0177 GRAS 1.3e-39 CL0063