Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0176 ATGGAACCATTGATACTTGAGCCCTCTTGGTCGTTCTCTGAAGGCATAAGCTCAATTTTTGATCAAGTTGAGCCTTTTGACTTCAACGTGGATACTTCTTTGTTCACTGCTTCAGAGGATGCATCTTCTTTAGAGATTACCTCCATGGTTCCCTTTCCTTCTACCATCTTCACTAATGATCATGTCTATTGTTCAATTGATGAAGACAACCTTCAACTTCCATCATTGATTGATGATTTCTCCATGGATCTTGATGCTTTTGATGCCACTTTGAGTTCTCAAATTCTGGGTATTCATGGATACGCACAAGGAGGTGAGGGAAGCTTTCCTTCACAGAACTTGTGTTCTGAGAGAGATGTTTGGAGTCCAACCCCATCGATGCAATCAGACATGTCTATAGTGGCACAAGCACAACCATCACTGATCATACCAGAAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTTTGGAAGCCACTGGAGAAGCCTTAGAGCATGGACACAACACACTTTCACAAGTTATTCTGAGACGCATCAGCCACAAAGTAAGCCCTGTAAGTGATCCTCTTGAACGTCTGGCATTCTATTTGTCCCAAAATCATGAAACAACAGAGCAGGGGACATTCATCAAACAGGAAGCTCGCAAGAGCTTCTACGATGCTTCCAAGGCTATCTACCAAGGCCTGCCACATGGAAGAATTGCTCATTTTGCAGCTAATTCATCAATTATAGGATCTATACCGGCTGATTCAGAATTCATACATATAATAGACTTCGATATGGGAGAAGGCAGTCAATGGCCTCCACTGATGGAGGTCATCGCTCAACAGCACAAAACTTTGAAACTGACCTCATTCAGATGGGAAGAAGAGAGACCAGATCTTGATTGTGTTTCAACTCAATGGAAATTTGAAGAAATCAGAAGGAACCTCCATGAGCATGCCAAATCATGTGGTTTGAAGTTGAAGGTGGAGGAACAGAGTATAGAAGAATTGGTGACAGAGCTCAAGAAATTGAACAAAAGGGGTAGCCATGGAAATGGAAAGAGAAATTTCGTGGCCTTCAATTGCATGGTGGGTCTCCCACATATGTCTAGGGTTAGAAGTAGAAGCCATGTCTGGGAATTTCTGAGGGTAGCAAATGATTTCATCAAAAGCTCAGCTTCAGACAGGGGAGTCATAGCTTTCGGCGATGGAGAAGCCTGTGAGAAACTCAGAAACAGCGCTAACTTCATGTCATTCTTTAATGGCCATTTGGTGCATTACCATGCTTTGTTAGAATCCATGGAATCAAATTTCCCATTCCAATTCTCAGAGGCAAGAACAGCGATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAAGATTGGTTTCAAAAGTGGGAGGAGATAAGACAAAACCGGAATCTTCAATCAGAAACAGAGTTAGAAGGTCGAAGCTTGAGGGAAGAGACATTAATGGAAGTCGCAGAAATGTTGAGAGGAATCGAAGGGTCATATGAGATCAAGATCGAAGGCAATAATGGCAATGAAATGGTTCTTCATTCGAAAGGAACAAAGCTTCTGAGAATTTCAATGCGGGGAAATTAA 1602 0.4232 MEPLILEPSWSFSEGISSIFDQVEPFDFNVDTSLFTASEDASSLEITSMVPFPSTIFTNDHVYCSIDEDNLQLPSLIDDFSMDLDAFDATLSSQILGIHGYAQGGEGSFPSQNLCSERDVWSPTPSMQSDMSIVAQAQPSLIIPEEDMEMENQLSLPHLLEATGEALEHGHNTLSQVILRRISHKVSPVSDPLERLAFYLSQNHETTEQGTFIKQEARKSFYDASKAIYQGLPHGRIAHFAANSSIIGSIPADSEFIHIIDFDMGEGSQWPPLMEVIAQQHKTLKLTSFRWEEERPDLDCVSTQWKFEEIRRNLHEHAKSCGLKLKVEEQSIEELVTELKKLNKRGSHGNGKRNFVAFNCMVGLPHMSRVRSRSHVWEFLRVANDFIKSSASDRGVIAFGDGEACEKLRNSANFMSFFNGHLVHYHALLESMESNFPFQFSEARTAMENLFVAPYISCEDWFQKWEEIRQNRNLQSETELEGRSLREETLMEVAEMLRGIEGSYEIKIEGNNGNEMVLHSKGTKLLRISMRGN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0176 533 ProSiteProfiles GRAS family profile. 147 532 IPR005202 -
Lele42g0176 533 Coils Coil 325 345 - -
Lele42g0176 533 Pfam GRAS domain family 158 529 IPR005202 -
Lele42g0176 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 147 497 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0176 Lele-ChrLele42 1449115 1450716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0176 131 456 GRAS Transcription Factor Family AT2G45160 24.786 4.58e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele42g0176 GRAS 3.2e-32 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0176 42 1449115 1450716 Lele42g0176 42 1449115 1450716 ECH
Lele42g0176 42 1449115 1450716 Lele43g1187 43 20248989 20250554 hybridization
Lele42g0176 42 1449115 1450716 Lele44g1174 44 20286849 20288254 hybridization