Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0152 ATGGATCAGATTCATCTTCATCATCATCTTCTTCCACAGCATCCACAACAACAACAAGAACATCATCTTCCTCCTCAGCCGGCTATTACCATGAATAACGTCGATGTTGGTGGAGGCGGTGTCGTCGTCGTCGACAGGTTACCGCAGTGGAGCGTGCAAGAGACGAAGGAGTTTCTGGCGATTCGAGCAGAGTTAGATCAGAGTTTTATGGAGACAAAGAGGAACAAGCAGTTATGGCAACTCATCTCTAACGCCATGATCGATAACGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACAAGGTACAAGGGATGTGAAACGGCGGAGCCAGAAAGTGTGAGGCAGCAATTCCCATTTTACAACGAACTTCAAGCCATTTTCACAGCGAGGATGCAGAGAATGCTATGGGCGGAGGCGGAAGGAGGAGGAGCGAAGAAGAAGACGGCAGCGGCGGCGGCGGCAACAAACGTGTCGTCAGAAGATGACGAAGAAGACAACGAAGAGATAAGCACTGATCATCGTCAGGGAGAGAGAAGCTCGAGGAAGAAGATGAAAAGAAGCAAAAGTTACAGTAGTGGTAACAAGTTGAAGGAGATTCTGGAAGAGTTCATGAGACAACAGATTCAGATAGAGACCCAGTGGATGGAAGCTTTTGAAGCGAGGGAGAAAGAGAGACGGAGGAAGGAGATGGAATGGAGGCAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAGAGATGGAGAGAGAGGGAAGAAGCGAGAAGGATTAGAGAAGAAGCTAGGGCTGAAAGAAGAGACGCTTTAATCACCACTCTTCTTAACAAGCTATGTAGTTAA 867 0.4821 MDQIHLHHHLLPQHPQQQQEHHLPPQPAITMNNVDVGGGGVVVVDRLPQWSVQETKEFLAIRAELDQSFMETKRNKQLWQLISNAMIDNGYLRSPEQCKCKWKNLVTRYKGCETAEPESVRQQFPFYNELQAIFTARMQRMLWAEAEGGGAKKKTAAAAAATNVSSEDDEEDNEEISTDHRQGERSSRKKMKRSKSYSSGNKLKEILEEFMRQQIQIETQWMEAFEAREKERRRKEMEWRQAMEALENERMMMEQRWREREEARRIREEARAERRDALITTLLNKLCS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0152 288 PANTHER FI21293P1 20 287 - -
Lele42g0152 288 Coils Coil 236 280 - -
Lele42g0152 288 Pfam Myb/SANT-like DNA-binding domain 49 133 IPR044822 -
Lele42g0152 288 CDD GT1 48 113 - -
Lele42g0152 288 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Lele42g0152 288 MobiDBLite consensus disorder prediction 149 198 - -
Lele42g0152 288 Gene3D - 50 111 - -
Lele42g0152 288 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0152 Lele-ChrLele42 1233733 1235756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0152 45 286 Trihelix Transcription Factor Family AT5G01380 51.894 1.86e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele42g0152 Myb_DNA-bind_4 1.5e-19 CL0123