Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0136 ATGGTTGGCAATTGCTTCGGTGCTTTGAATTGTTTGAGGGGGAAGAATGAACAGTCAGATGAACAAGTGATTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCCACAGGAGATTTTCATCCATCTAGCAGAATTGGTGGCGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACAAAGGAATTTATGACAGAAATCGATATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTAATTGGCTGCTGCATTGAGGGTTACCATCGGATGTTGGTGTATGAGTTTTTGGAAAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCCAAAAGCAAATGTGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGTTGCGGTACAGCTTCTGGTCTTGAATTTCTTCATGAAGAAGCTCAACCGAACATTGTTCACAGAGATATCAAGGCTAGCAACATACTGCTTGATTTGAACTTTAATCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCCGACGATGTTACTCATGTTAGTACTCGAGTGGCAGGAACTGTGGGATATCTAGCACCAGAATATGCTCTTCTAGGACAACTTACAAAGAAGGCGGATGTGTACAGTTTCGGGATTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTAGATCCCGAACTCACTGAATATGATGAGATGCAGATGTTGCGTTTCATTAAGATTGCTCTGTTCTGTACCCAAGCAGCCGCACAACACAGACCCAACATGAAGCAAGTAACAAAAATGCTCACCAGGGAAGTGCATTTGAATGAGAAGGCACTAACCGTACCTGGAGTTTATAGGTGGAATAGCTCCAAAGAGTATGGCAATTCTTCGTTGGACGAGACATCATCTTCTCAAGCAAACGAGTACAGAAGTTCCAAAATTCCCTACATGACATCAAGCCATTTTAGTGGTGCTGATTTGGATACTCAGATAGTTCCTAGGTGA 1134 0.4171 MVGNCFGALNCLRGKNEQSDEQVIATKTFSYNSMRSATGDFHPSSRIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTKEFMTEIDIISKIQHPNLVQLIGCCIEGYHRMLVYEFLENNSLASSLLGSKSKCVALDWPKRAAICCGTASGLEFLHEEAQPNIVHRDIKASNILLDLNFNPKIGDFGLAKLFPDDVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDPELTEYDEMQMLRFIKIALFCTQAAAQHRPNMKQVTKMLTREVHLNEKALTVPGVYRWNSSKEYGNSSLDETSSSQANEYRSSKIPYMTSSHFSGADLDTQIVPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0136 377 ProSitePatterns Protein kinases ATP-binding region signature. 47 69 IPR017441 GO:0005524
Lele42g0136 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 348 - -
Lele42g0136 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Lele42g0136 377 Gene3D Phosphorylase Kinase; domain 1 9 116 - -
Lele42g0136 377 Gene3D Transferase(Phosphotransferase) domain 1 117 324 - -
Lele42g0136 377 FunFam Receptor-like serine/threonine-protein kinase At4g25390 10 116 - -
Lele42g0136 377 CDD STKc_IRAK 60 313 - -
Lele42g0136 377 SUPERFAMILY Protein kinase-like (PK-like) 21 311 IPR011009 -
Lele42g0136 377 FunFam Putative LRR receptor-like serine/threonine-protein kinase 117 323 - -
Lele42g0136 377 SMART serkin_6 41 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0136 377 Pfam Protein tyrosine and serine/threonine kinase 45 311 IPR001245 GO:0004672|GO:0006468
Lele42g0136 377 ProSiteProfiles Protein kinase domain profile. 41 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0136 Lele-ChrLele42 1080809 1084343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0136 12 372 Receptor kinase-like Gene Family AT1G53430 46.049 2.33e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele42g0136 PK_Tyr_Ser-Thr 9.1e-46 CL0016