Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0133 ATGGAGGAAGAAGATGTGAGGGTTGGAGCCAACAGGTATGGAGAAAGGCAACCGATAGGAACGGCGGCTCAGAGCCAAGATGGGAGAGACTACAGTGAGCCACCTGCTGCGCCATTGGTTGAAGTTGGTGAGTTATCTTCATGGTCTTTCTATAGAGCAGGCATTGCAGAGTTTGTGGCCTCTTTCTTGTTCCTCTACGTCACCGCTTTGACTGTCATTGGGGTGGCTAAATCTCCCTCTAAGCGCTCCACTGTTGGCACTCAAGGCATTGCTTGGGCTTTTGGTGGCATGATCTTTGCTCTTGTCTACTCCACTGCTGGTATCTCAGGTAAGTGCTTGGGCGCCATCGCCGGAGCCGCCATCGCCGGAGCCGCCATGGTTAAGGGCTTCCAACCACATACCTATGAGAGACTTGGCGGTGCTGCTAACACTCTCGCTTCTGGCTACTCTAAAAGCTCAGGCCTTGGAGCTGAGATCCTAGGCACATTTGTTCTTGTTTATACTGTCTTCTCTGCTACTGATGCCAAGCGAAATGCTAGAGACTCCCATGTTCCTGTATTGGCACCACTGCCTATAGGGTTTGCTGTGTTTTTGGTGCATTTGGCTACAATTCCTGTGACAGGCACAGGTATCAACCCAGCAAGAAGTCTTGGAGCTGCTCTAATCTTCAACAAGCACCAAGTTTGGCATGAACATTGGATTTTCTGGGTTGGGCCTCTCATAGGAGCAGCTCTTGCAGCCCTGTACCACCAGATTGTGATAAGGGCCATCCCCTTCAAGTCTAACTGA 789 0.5082 MEEEDVRVGANRYGERQPIGTAAQSQDGRDYSEPPAAPLVEVGELSSWSFYRAGIAEFVASFLFLYVTALTVIGVAKSPSKRSTVGTQGIAWAFGGMIFALVYSTAGISGKCLGAIAGAAIAGAAMVKGFQPHTYERLGGAANTLASGYSKSSGLGAEILGTFVLVYTVFSATDAKRNARDSHVPVLAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALIFNKHQVWHEHWIFWVGPLIGAALAALYHQIVIRAIPFKSN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0133 262 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 PRINTS Major intrinsic protein family signature 233 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 MobiDBLite consensus disorder prediction 1 33 - -
Lele42g0133 262 Gene3D Glycerol uptake facilitator protein. 115 261 IPR023271 -
Lele42g0133 262 Gene3D Glycerol uptake facilitator protein. 37 114 IPR023271 -
Lele42g0133 262 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 119 258 IPR034294 -
Lele42g0133 262 FunFam Putative aquaporin PIP-type 7a 127 258 - -
Lele42g0133 262 SUPERFAMILY Aquaporin-like 45 255 IPR023271 -
Lele42g0133 262 Pfam Major intrinsic protein 120 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele42g0133 262 Pfam Major intrinsic protein 44 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0133 Lele-ChrLele42 1061622 1063696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0133 2 262 Major Intrinsic Protein MIP AT3G61430 68.858 2.59e-134 379