Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0129 ATGAGCCACCGTGGTGCAAGTTCCAGAGTCCTAGCATTACAAATCCTTGTTGGATTGCTTATTTTGTGCATGTGCTCATCATTTAGCTCTGCAACTGTGATCCTACAAGGAAACGAAACTGATTTTCAAGCTTTGCTTGACTTCAAGAGTCGGATATATCCATTCAAGATATTGAGTTCCTGGAACAACTCCATCCATCACTGCAAATGGGTAGGAATCACCTGCAACACCTCCACTGGACGGGTGGTGCAACTGAGCCTTGGACAACAGAGATTGGCTGGCACCGTTTCACCTTCAATAGGAAACCTCACATTCCTCAGAGTACTTAATCTAAGGTTCAACAGCTTCCATGGTGAATTTCCTAATGAAGTTGGACGTCTGTTATACCTTCAAAATCTAAGCATCACCCTTAATTACTTCACTGGAGGTATACCAAGTAATCTGAGTTACTGTAAGGAACTGAGGATTTTATTTGCAGGTAGTAACAATTTAACAGGAAACATCCCAACATGGATAGGGAATTTATCTTCTTTATCTAAAATTGGGCTTGGAGTGAACAACTTCCATGGAAGCATACCAAAAGAGATGGGCTATTTATCAGGCTTGACATTTCTTGGAGTAAATGGTAATTACCTATCTGGTACAGTTCCTCCTTCTATTTACAACATTTCCTCTATAAACTACATCACCGTTGGTCAAAACAAACTGCAAGGTAGTATACCAACTGATGTTGGATTAAGTCTTCCTAACCTTGAGATATTTGGCGGGGCAGTCAACAATTTCACCGGAACTATCCCAGTATCATTGGTAAATGCTTCAAGGCTACAACTTCTTGATTTTGCTCAAAATGCTCTAACTGGAACACTGCCTAAGAACTTAGGAGTTTTGAAAAGTTTATTTTGGCTCAACTTTGATGAAAATAGGCTTGTATCTGATGGAAAAGATTATGATGGCCTGAGTTCTCAAATTACTTCTCTGGTTAATTGCACTGAACTTGAATTTTTAGGTCTTGAAGGAAATATGTTTGGAGGAGGATTGCCCAACTTGATCACTAATTTATCAAGCAGATTAAGAAAATTAAAACTAGGTAAAAATAAATTATATGGAAGCATCCCTGCTGCAATTGGACATCTTGCTAGTTTGGAACGTCTAGGATTGGAAGGAAACCTTCTAGCTGGCAGTGTCCCTGATGGAATAGGTAAACTCAAAAATTTGGGCCGTTTGAATTTGAATGGCAACAAATTTTCAGGAACAATCCCTTGGTCTATAGGAAACTTAACTTCATTAATACTACTCTTCATGGAGGATAACAACTTTGAGGGAAGTATACCTTCAAGCCTCGGAAATTGTCAGAAGCTTCTGGTACTAAGTCTCCATAATAACAAGCTCAGTGGCACCATACCAAAACAAGTGATTGCCATTTCTTCGCTTTCAATATACTTGGACGTCTCTAATAATGTTCTCACAGGACCCATACCAGATGATGTGGGAAATTTGCGTAGTCTAGCAGAGCTAGTACTCTCGGAGAACAACTTTTCCGGTGTCATTCCATCTTCTCTTGGAAAATGTGTCAGCTTGGAGCGGTTGCACTTGCAGGGTGGCCTAAAGGGTTCAATTGGATACATTCCGCCAGAGTATGGTATGGGTGGGCAACCTTCAACATTAGGAGATATCTATAGCTATGGGATACTATTACTGGAGATTTTCACAGGTAAAAGACCCACAAGTGATGAATTTGAAGGAGGGATAGGAATTCACCAGTATGTTGAAATGGCTTTGCCCAATCATGCCATGGAGATAATTGATCCTTTTCTGCTACCTGAAGAAGAAAATGAAGATGAAGAGATATATTTGGAGAAAGCTATAAGGAAGGGAAACCGAAGACGCAGAGTAATGGAGGATTGCTTGGGTTCGTTGATGCAAGTGGGAGTGTCTTGCTCTGCAAATGGGCCACTGGAGAGGCTGCAGTCTATGAATATGGTCGTTAACAAACTCCAAGCAATCAAGAAATCGTACGTCTCCAAATAA 2028 0.4043 MSHRGASSRVLALQILVGLLILCMCSSFSSATVILQGNETDFQALLDFKSRIYPFKILSSWNNSIHHCKWVGITCNTSTGRVVQLSLGQQRLAGTVSPSIGNLTFLRVLNLRFNSFHGEFPNEVGRLLYLQNLSITLNYFTGGIPSNLSYCKELRILFAGSNNLTGNIPTWIGNLSSLSKIGLGVNNFHGSIPKEMGYLSGLTFLGVNGNYLSGTVPPSIYNISSINYITVGQNKLQGSIPTDVGLSLPNLEIFGGAVNNFTGTIPVSLVNASRLQLLDFAQNALTGTLPKNLGVLKSLFWLNFDENRLVSDGKDYDGLSSQITSLVNCTELEFLGLEGNMFGGGLPNLITNLSSRLRKLKLGKNKLYGSIPAAIGHLASLERLGLEGNLLAGSVPDGIGKLKNLGRLNLNGNKFSGTIPWSIGNLTSLILLFMEDNNFEGSIPSSLGNCQKLLVLSLHNNKLSGTIPKQVIAISSLSIYLDVSNNVLTGPIPDDVGNLRSLAELVLSENNFSGVIPSSLGKCVSLERLHLQGGLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTSDEFEGGIGIHQYVEMALPNHAMEIIDPFLLPEEENEDEEIYLEKAIRKGNRRRRVMEDCLGSLMQVGVSCSANGPLERLQSMNMVVNKLQAIKKSYVSK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0129 675 SUPERFAMILY Protein kinase-like (PK-like) 532 669 IPR011009 -
Lele42g0129 675 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 38 193 - -
Lele42g0129 675 Gene3D Ribonuclease Inhibitor 402 480 IPR032675 -
Lele42g0129 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 537 664 - -
Lele42g0129 675 Gene3D Ribonuclease Inhibitor 315 401 IPR032675 -
Lele42g0129 675 SUPERFAMILY RNI-like 247 533 - -
Lele42g0129 675 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 325 547 - -
Lele42g0129 675 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Lele42g0129 675 Gene3D Ribonuclease Inhibitor 33 95 IPR032675 -
Lele42g0129 675 Gene3D Ribonuclease Inhibitor 96 314 IPR032675 -
Lele42g0129 675 Gene3D Transferase(Phosphotransferase) domain 1 504 675 - -
Lele42g0129 675 SUPERFAMILY L domain-like 49 347 - -
Lele42g0129 675 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 194 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0129 Lele-ChrLele42 1032305 1035463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0129 533 674 Receptor kinase-like Gene Family AT5G20480 33.793 1.03e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele42g0129 LRRNT_2 4.1e-10 No_clan