Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0120 ATGCCCTCTTCTTCCACCATCGTCTCCAAATGCACTGTTTACCCTAATCAGCCCTCATCCCTCAAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGCCACTACATCCAAAAGGGTATCCTCCTCCCTCCGCCGCCTTTCTTCTTCCCTGACCTCCTTCTCTCCCTTAAGCGCTCTCTTTCCGTCACTCTCTCCTTTTTCCCTCCCCTCGCCGGCCGCCTCTTCACTGATTCCGACGGCAATGTCAATATTCAGTGTAACGACGCCGGCGTCGACTTCATCCATGCCTCTGCCAAACACCTTGCCACCTCCTCCATCCTTTACCCTTCCACATTCACTGACGTCCCCAATTGCTTCGAGCAGTTCTTCGCCCACAGCAAGACTATCTCCTACTCCGGCCACACTCTCCCCCTCGTTGCCGTCCAAGTCACTGAGCTAGCTGATGCGGTTTTCATCGGATGCACTGTTAATCATGCCGTTGTCGACGGCACTTCCTTATGGCATTTCTTCAACACCTTCGCAGAGATCTGCAAAGGAGAGAAAATTTCCAAATCCCCCGACTTCACTCGGGACACCGTTTTCAACTCCTCCGCCGTGCTTAAAGTCCCAGCCGGTGGCCCCAAGGTTACGTTCGACGACGAACAGCCGTTGAGGGAGAGAGTGTTCCATTTCAGCAGCATCGCAATTCAAAAACTTAAGCTCAGAGCTAATCACTATGGCCGGAACGGTTTCACGGATGCTACAGAGTTCGTGGAGAAGCAAGTTAACGGCAATATAACGCCCGTCGGGGCGGATGGGATTGCCGACAAGACGGAAGAGATTTCGTCGTTTCAATCATTGTCCGCACAGCTGTGGCGTTCAGTGACACGTGCGAGGAAGTTGGACCCACGCAAAATGTCGACGTTTCGCATGGCGGTGAACTGCCGCCGCCGTCTGGAGCCGAAGATGGACGCTTATTACTTCGGGAACGCGATACAGAGCATTCCGACCGTTGCTGAGGTCGGAGAGATTCTGTCTCGGGATCTACGGTCATGTGCGGATCTGCTGCACAAAAACGTCGTCGCACATGACGACGCTACGGTGCGAGGCGGCATAGAGGATTGGGAAAAGGCACCCCGGTTGTTCCCGCTGGGTAACTTCGACGGTGCTTCGATGACCATGGGTAGCTCTCCGCGTTTTCCGATGTACGACAATGACTTTGGGTGGGGCCGACCATTGGCGATCCGGAGCGGGAAGGCCAACAAGTTTGACGGTAAGATCTCTGCGTTTCCAGGGAGAGAAGGAAAAGGGAGCGTTGATCTGGAAGTCGTTTTGGCGCCTGAAACGATGGCGGGGCTTGAAAACGACACGGAGTTCATGCGGTACGTAACGGGAACCGCGTAA 1392 0.546 MPSSSTIVSKCTVYPNQPSSLKSLKLSVSDLPMLSCHYIQKGILLPPPPFFFPDLLLSLKRSLSVTLSFFPPLAGRLFTDSDGNVNIQCNDAGVDFIHASAKHLATSSILYPSTFTDVPNCFEQFFAHSKTISYSGHTLPLVAVQVTELADAVFIGCTVNHAVVDGTSLWHFFNTFAEICKGEKISKSPDFTRDTVFNSSAVLKVPAGGPKVTFDDEQPLRERVFHFSSIAIQKLKLRANHYGRNGFTDATEFVEKQVNGNITPVGADGIADKTEEISSFQSLSAQLWRSVTRARKLDPRKMSTFRMAVNCRRRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRSCADLLHKNVVAHDDATVRGGIEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGKGSVDLEVVLAPETMAGLENDTEFMRYVTGTA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0120 463 Gene3D - 208 451 IPR023213 -
Lele42g0120 463 Gene3D - 5 207 IPR023213 -
Lele42g0120 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 456 - -
Lele42g0120 463 Pfam Transferase family 6 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0120 Lele-ChrLele42 939613 941004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0120 50 451 Monolignol Biosynthesis Gene Families AT5G48930 27.446 1.44e-36 137