Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0112 ATGTCTGTCACACAGGCAATAAAAATATTTTCTGATGCACGCCCTCCTGGAATCTACAAACCTGATTACATTGATGCCTTGTACACATTTTATCATGAAAAAAAGCCCGACATGGTGGTTTGTCCTCCCACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTTAATGGTGAAGCAGTGCCGGATGATGACGATGACTTAATGCCAGGCCCTCCTTTGGATGAGAACCATGAGACAGATGTGTTGATGACAAATGATGATGTCCTGGGAGATGAGATACCTGATGATCAGCAAGATTCATTCCGGCAGTTATGTTATCAATCACTTAAATTGGGTGCTGGGGCTAGAGGACATACACAATTTCCAGGGTCACACCCAGTTTCTCTGAACAGGGGGACGAATGATGTGTTGGCCGAGAAAACCCACCATTACACATTACTTGATGGGGAGATGATTATTGATACTTTGCCTGCTTCAAAGAAGCAGGAGAGGAGATACCTTATATATGATCTAATAGCCATCAACCAAGTATCAGTAATAGAGCGACCTTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACAAAGCTCTTATTGGAATTCATTCCAAAACTCTCTCATGCTGCTGACGGCCTCATATTTCAGGGCTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTCTTGAAGTGGAAATATCCTGAGATGAATTCAGTTGATTTCCTCTTTGAGATTGATGATGATGGTGAGAAACTTTTTCTTCATGAACGAGGAAAGAAGAAGCTCATGGAAGGGAATAGGGTAGCATTCAAAGATGGTTTAGATCCCTCATTTTATTCTGGAAAAATCATAGAGTGTTCTTGGGACTCTGATAACCATGAATGGGAATTCATGCGAGTGAGAACTGATAAATCAACTCCAAATGAGTTCAATACTTTCAAGAAGGTGATGGGAAGCATAAAAGATAATATTACAGAAGATGTTTTGTTGAACGAGATATCCAAGATTATTCGCATTCCCATGTACTCCGACAGGATAAGAATCGACAGTAAAGCGCACCATCATACTAACGCAGCACGGAGAAGTGTTCCTGCGGCCATTGAGGGTAGAAATGAGCTCCAGAGTCAAGGAGCTGCAATGAACTAA 1269 0.4169 MSVTQAIKIFSDARPPGIYKPDYIDALYTFYHEKKPDMVVCPPTPEWKRSSEFDLNGEAVPDDDDDLMPGPPLDENHETDVLMTNDDVLGDEIPDDQQDSFRQLCYQSLKLGAGARGHTQFPGSHPVSLNRGTNDVLAEKTHHYTLLDGEMIIDTLPASKKQERRYLIYDLIAINQVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLLEFIPKLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDGEKLFLHERGKKKLMEGNRVAFKDGLDPSFYSGKIIECSWDSDNHEWEFMRVRTDKSTPNEFNTFKKVMGSIKDNITEDVLLNEISKIIRIPMYSDRIRIDSKAHHHTNAARRSVPAAIEGRNELQSQGAAMN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0112 422 Gene3D DNA ligase/mRNA capping enzyme 133 273 - -
Lele42g0112 422 Gene3D Protein tyrosine phosphatase superfamily 1 66 IPR029021 -
Lele42g0112 422 Gene3D - 274 365 IPR012340 -
Lele42g0112 422 CDD Adenylation_mRNA_capping 96 274 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele42g0112 422 Pfam mRNA capping enzyme, catalytic domain 138 273 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele42g0112 422 Pfam mRNA capping enzyme, C-terminal domain 278 371 IPR013846 -
Lele42g0112 422 SUPERFAMILY Nucleic acid-binding proteins 276 387 IPR012340 -
Lele42g0112 422 FunFam mRNA capping enzyme family protein 272 380 - -
Lele42g0112 422 PIRSF mRNA_capping_HCE 1 141 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele42g0112 422 PIRSF mRNA_capping_HCE 133 406 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele42g0112 422 PANTHER MRNA-CAPPING ENZYME 139 377 - -
Lele42g0112 422 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 49 IPR029021 -
Lele42g0112 422 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 130 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0112 Lele-ChrLele42 858041 867829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0112 1 393 Protein tyrosine phosphatase (PTP) family AT3G09100 62.584 0.0 543