Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0099 ATGGAGTGTCACATGGAAGTGGATGAAAAACCCGTCATTGAGTTCGACAAACCACCCGTCGGAGACGTTGGCGGCGGTGGAGACGGCGGTAGTGGTGACGAGGGTTTAACAGCGTTAGGTGACGCAGGTGGGAGTAGCTCCCAGGGGGCTAAAGACAGAGTGAAGGGTCCCTGGTCTCCAGAGGAGGACGCGATACTGAGTCGACTTGTTAGCAAGTTCGGGGCCCGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCGTGCCGGCTCCGGTGGTGTAATCAACTCGACCCAGCTGTGAAGCGCAAGCCCTTTACTGATGAGGAGGATAGGATCATAGTTGCAGCACATGCAATCCATGGGAACAAATGGGCAGCCATAGCCAGACTTCTACCAGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTTTGAGGCGTCGGGGAATAGAACTTGATAAAGTTAAATTAGAAGCTTGCAACACAATGGATGATGTCAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAAACTCAGTCATGTGGGGATGTTAATTCCTTCAGATCCTCAGAAGGAAGAGATGTCAGTTCTTTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGACAGAGAGTCAAATGAACCATGAAGTCAAGGATCCACCTACTCTTTTCCGACCTTTAGCACGTATTAGTGCTTTTAGTGTATATAACTCATTGGATGGTTCACAACCTGCAACATCAACCTCTAAGCCAGTTCCAATGCAAGGACCGCTTTTTCAAGCATCAAAGCCAGGTATGGAAATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTTCCTAACCACTGTGGCCATGGTTGTTGCACTGGTGTAAGTGGTGAACATGCCAAAAGCTCCTTGTTGGGGCCAGAATTTATTGATTTTTCAGAGCCGCGGTCATTCCCAAGTTTTGAGTTGGCAGCCATAGCTACAGACATCAGTAACCTTGCTTGGCTGAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGAGTGACTCAACCGGCAGGGTGATATCTCAGGGGTCTCAAGTGAATATTGGCCATTAA 1125 0.4693 MECHMEVDEKPVIEFDKPPVGDVGGGGDGGSGDEGLTALGDAGGSSSQGAKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIELDKVKLEACNTMDDVSLEKAKASSEETQSCGDVNSFRSSEGRDVSSLENMEDKYEDKAQTESQMNHEVKDPPTLFRPLARISAFSVYNSLDGSQPATSTSKPVPMQGPLFQASKPGMEICKMLDGIYGCDLSVPNHCGHGCCTGVSGEHAKSSLLGPEFIDFSEPRSFPSFELAAIATDISNLAWLKSGLENSSVKMMSDSTGRVISQGSQVNIGH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0099 374 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Lele42g0099 374 Gene3D - 109 155 - -
Lele42g0099 374 Gene3D - 54 106 - -
Lele42g0099 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 105 IPR017930 -
Lele42g0099 374 MobiDBLite consensus disorder prediction 180 201 - -
Lele42g0099 374 FunFam MYB transcription factor 55 106 - -
Lele42g0099 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 156 IPR017930 -
Lele42g0099 374 SUPERFAMILY Homeodomain-like 52 148 IPR009057 -
Lele42g0099 374 CDD SANT 57 99 IPR001005 -
Lele42g0099 374 Coils Coil 205 225 - -
Lele42g0099 374 MobiDBLite consensus disorder prediction 178 206 - -
Lele42g0099 374 MobiDBLite consensus disorder prediction 1 16 - -
Lele42g0099 374 PANTHER MYB PROTEIN-RELATED 55 210 - -
Lele42g0099 374 FunFam Transcription factor MYB44 109 155 - -
Lele42g0099 374 Pfam Myb-like DNA-binding domain 58 115 - -
Lele42g0099 374 CDD SANT 109 152 IPR001005 -
Lele42g0099 374 ProSiteProfiles Myb-like domain profile. 50 101 IPR001005 -
Lele42g0099 374 SMART sant 106 154 IPR001005 -
Lele42g0099 374 SMART sant 54 103 IPR001005 -
Lele42g0099 374 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0099 Lele-ChrLele42 768233 771036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0099 44 374 MYB Transcription Factor Family AT3G09230 50.440 4.82e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele42g0099 Myb_DNA-bind_6 1.1e-15 CL0123