Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0096 ATGGGAAGGGGTGATGTGAGTTGGTGGGGTGGAAGGTGGATGTGGATGGAGATGGCGGAGTGGTGGCCACGTGGAGAAGATTGTGTTGAGGAAAATGGTGCTTGCCTCAAGTGTGTGGTGTTGAAGATATGGAAGTTGTCATTACACGATTACAAAGAGTTCAATAACATGTCGCTTTACATTAATCGCGAGGCTTCGAAGCTATGGAAGAGAATTTGGGCAGAGACAACCACAGAGATCAACCTTCTTGCAGAGAATTGGAAATACATTCTCGCTGGTCTTATTTTTCAGTACATACATGGTCTAGCTGCCCGAGGAGTTCACTATTTACATAAGCCTGGCCCTATTCTTCAGGATGTTGGATTCTTCCTTCTACCGGAGCTTGGGCAAGACAAAGCTTACATCAGTGAAACATTGTTCACCTTCATCTTTTTATCCTTCGTCCTGTGGACATTTCATCCTTTCATTTTGAAGAGCAAAAAGATCTATACAGTTCTAATATGGTGCAGGGTTCTAGCATTCTTAGTTGCTTCTCAATTTCTTCGCATTATCACATTTTATTCGACACAACTTCCTGGTCCAAATTACCATTGCCGAGAGGGTTCAAGACTTGCCACGCTGCCTTCTCCAAAGAGTGTCTCAGAAGTTCTCTTGATTAATTTCCCCCGTGGTGTGATATATGGATGTGGTGATTTGATATTCTCATCACACATGATCTTTACTCTAGTCTTTGTGCTGACGTATCAGATATATGGCACAAGAAGGTGTATTAAGCAGTTAGGGTTCGTCCTTGGTGTGATTCAGAGTCTCTTGATAATTGCATCTCGCAAACATTACACAGTTGATGTAGTTGTTGCCTGGTACACTGTTAATTTGGTGGTATTTTTTGTCGAGAAGAAGTTGCCAGAATTACCCGACAGGTCCAACGCCGCAGTAGCCTTATTGCTACCATTGAGCAACAAAGACAGAGATGGCCGGACCAAGGAAGAGACCCACAAGCTATTGAATGGGAATTCTGGGGATCCTGCAGACAGGGTATGGCAGAGAACTCAAGTAAATGGTAAGATTCTGGAGGATGTTAATGCACACCTTGCTGACACTGCGATGAATGTCACATGGGGAACTAATGATGAGGACAAATGTTTTAGAGCCAACCAATAAAATGGAGGGAAGAATGAGGGAGAAAAGTGGCCAAGTTTTGGGGAGTTTAGCTTGGAGCAATTGAAGGTGTCTACTAATGGATTCTCCTCTGAAAACATAGTGTCTGAGCATGGAGAAAAAGCTCCCAATGTCGTTTACAAAGGGCAGCTCGAGGATGGTCACATGATCGCCATCAAACGCTTCAACAAATTTGCTTGGCCTGATTCTCGCCAATTCCTCGAGGAAGCTAAGCAAGTGGGGAGTCTGAGAAGTGAGAGATTAGCCAACTTGATTGGTTATTGCTATGAAGGGGACGAAAGGCTGCTGGTAGCAGAGTTCATGCCACATGAAACTCTGGCTAAACATCTCTTTCATTGGGAAGCACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCCTTGCACTTAGCTCAAGCTCTAGAGTACTGCAGCAGTAAAGGAAGGGCCTTATACCATGATCTCAATGCCTACAGGATCTTGTTTGATCAGGATGGTAGTCCGAGGTTGTCTTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCCTTCACACCTCCTGAGTACTTGAGAACAGGTAGAGTGACACCAGAGAGTGTAGTTTACAGTTTTGGAACTTTAATGCTAGATCTTCTGAGTGGCAAACATATTCCACCTAGCCATGCACTCGATCTGATCCGTGGAAAGAACTTCTTGATGTTAATGGATTCTGCCTTAGAAGGTCACTTTTCAAAGGAGGATGGAACCGAATTGGTGCGGTTGGCTTCTCGTTGTTTGCAGTATGAAGCTCGTGAGAGACCAAATGCAAAGTCTCTTGTTACATCTCTAATGTCACTTCAAAAAGAAACTGAGCTTTCATTTCAGTTGTGGACCAGTCAAATGCAGGAGACCCTGAACTTGAAGAAGCATGGAGATACTGCTTTCCGAGCCAAGGACTTCGTCACTGCCATTGACTGCTACACAAAAGAAAAGTTCATAGATGGAGGGACCATGGTGTCGCCTACCGTGTATGCGAGGCGCTGCTTGTCTTATTTGATGAATGGGATGTCACAAGGAGCTCTTGGGGATGCAATGCAAGCCCAAGTGGTGTCACCTGAGTGGCCTACTTCTTTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAGAATGATGCACAAGAAACTCTCAGGGATGGGACAAACATGGAAGCCAGAAAGAACAAAAATTCGAAAACTGTATAG 2406 0.4456 MGRGDVSWWGGRWMWMEMAEWWPRGEDCVEENGACLKCVVLKIWKLSLHDYKEFNNMSLYINREASKLWKRIWAETTTEINLLAENWKYILAGLIFQYIHGLAARGVHYLHKPGPILQDVGFFLLPELGQDKAYISETLFTFIFLSFVLWTFHPFILKSKKIYTVLIWCRVLAFLVASQFLRIITFYSTQLPGPNYHCREGSRLATLPSPKSVSEVLLINFPRGVIYGCGDLIFSSHMIFTLVFVLTYQIYGTRRCIKQLGFVLGVIQSLLIIASRKHYTVDVVVAWYTVNLVVFFVEKKLPELPDRSNAAVALLLPLSNKDRDGRTKEETHKLLNGNSGDPADRVWQRTQVNGKILEDVNAHLADTAMNVTWGTNDEDKCFRANQXNGGKNEGEKWPSFGEFSLEQLKVSTNGFSSENIVSEHGEKAPNVVYKGQLEDGHMIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVALHLAQALEYCSSKGRALYHDLNAYRILFDQDGSPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLMLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKEDGTELVRLASRCLQYEARERPNAKSLVTSLMSLQKETELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTKEKFIDGGTMVSPTVYARRCLSYLMNGMSQGALGDAMQAQVVSPEWPTSLYLQAACLFSLGMENDAQETLRDGTNMEARKNKNSKTV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0096 801 Gene3D Transferase(Phosphotransferase) domain 1 495 684 - -
Lele42g0096 801 SUPERFAMILY TPR-like 691 786 IPR011990 GO:0005515
Lele42g0096 801 Gene3D Phosphorylase Kinase; domain 1 390 493 - -
Lele42g0096 801 FunFam probable serine/threonine-protein kinase At5g41260 495 685 - -
Lele42g0096 801 Pfam Protein tyrosine and serine/threonine kinase 432 669 IPR001245 GO:0004672|GO:0006468
Lele42g0096 801 Pfam PAP2 superfamily C-terminal 228 296 IPR025749 -
Lele42g0096 801 FunFam probable serine/threonine-protein kinase At4g35230 390 493 - -
Lele42g0096 801 SUPERFAMILY Protein kinase-like (PK-like) 397 678 IPR011009 -
Lele42g0096 801 ProSiteProfiles Protein kinase domain profile. 418 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0096 801 Gene3D Tetratricopeptide repeat domain 687 801 IPR011990 GO:0005515
Lele42g0096 801 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 383 677 IPR045845 GO:0004672|GO:0009742
Lele42g0096 801 FunFam probable serine/threonine-protein kinase At4g35230 688 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0096 Lele-ChrLele42 736315 751615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0096 403 669 Glycoside Hydrolase AT3G07070 34.576 2.45e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele42g0096 PK_Tyr_Ser-Thr 5.1e-26 CL0016