Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0089 ATGGCCGGAAAAGAAGAACAAGTGAAGGTGTTGGGGAAATGGCCCAGCCCCTTCAGCAACAGAGTGGAGCTCGCTCTCAAGCTGAAAGGAATCAACTACGATTACTCTGAAGAAGATCTCTCCAACAAGAGCCAAGAACTTCTTGTGTCCAATCCCGTTCACAAGAAGGTCCCTGTTCTCATTCACAACGGAAAAACCATTTCAGAGTCTCTGGTCATCGTTGAGTACATCGATGAAACCTGGAAATCCAACCCCTTCCTCCCTCTCGACCCTTATCACAGAGCCTCCGCTCGATTCTGGTCCAAGCTTATCGATGACAAGTGCTTGCCGGCTTTATGGAATGCGTTCTGGTGCGAGGAGAAGGCGCGTGAGAAGGCTGTGGAAGAATCCATGGAAGCACTGAAGATACTGGAGAATGAAATCGCCGACAAGAGATTCTTCGGAGGGGACGAGGTTGGACTCGTGGATGTATCTGCCAACTTCGTGGCTTACTGGGTTGATGTGTTACAAGAGATTGCAGGCTTACAATTGCTGACGTCAGAGAAATTCCCGAAGCTGTACAAATGGAGTCGAGAGTTTTCTGCTCATCCTATCCTAAAGCAAGCTCTGCCTCCAAGAGAGAAACTCTTTGCATTCTTCAAATCTCGCACTGCCTAG 657 0.4871 MAGKEEQVKVLGKWPSPFSNRVELALKLKGINYDYSEEDLSNKSQELLVSNPVHKKVPVLIHNGKTISESLVIVEYIDETWKSNPFLPLDPYHRASARFWSKLIDDKCLPALWNAFWCEEKAREKAVEESMEALKILENEIADKRFFGGDEVGLVDVSANFVAYWVDVLQEIAGLQLLTSEKFPKLYKWSREFSAHPILKQALPPREKLFAFFKSRTA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0089 218 SFLD Main (cytGST) 4 216 - -
Lele42g0089 218 CDD GST_N_Tau 8 81 - -
Lele42g0089 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 209 IPR045073 -
Lele42g0089 218 Gene3D Glutaredoxin 1 89 - -
Lele42g0089 218 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Lele42g0089 218 Pfam Glutathione S-transferase, C-terminal domain 119 197 IPR004046 -
Lele42g0089 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Lele42g0089 218 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lele42g0089 218 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Lele42g0089 218 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Lele42g0089 218 FunFam Tau class glutathione S-transferase 87 218 - -
Lele42g0089 218 FunFam Tau class glutathione S-transferase 1 89 - -
Lele42g0089 218 Gene3D - 90 218 - -
Lele42g0089 218 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Lele42g0089 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0089 Lele-ChrLele42 681450 682190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0089 4 215 Glutathione S-transferase Gene Family AT3G09270 55.140 4.29e-85 249