Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0073 ATGGTGCAACAGAGGGTCGTTCCAGCAATAACCTTAATCTTCACAACGGTGGTGCTACTATCTTGTGCTGGTGGCGCCGCCGCTCGGCGTTGTGGCAAATGCGGGTTGAATCCGGTTCCATACCCGTTAAGCACGGGACCCAAATGTGGCCATCCGAAGTATAATATAAAGTGCATAAAAGGCCAGTTGTGGTTTGACTGTCTCGGTGGATCTTCTTACATGATAAAGTTCATTAATGCGGTAACTCGCCGGATCATTATACGACCCGCAAGCATCGCCCCAAATATGTGTGTGTCCACAGACTTCTGCAACGAAGGCATACACCTGTACAAAACCCTTCCTTTTAAAATCGCCAGCAATAACACCGTCTTTCTGTATAACTGTACAAACGCGGTGCTGAAATCAAAACCGCCTTTGGACTGTGCACCGACTGACCTGTGTCATAGCTACATTAAGGACCATGCAGATGGCGGCGGCGCGTGCCTGAGCATGGGGTTGTGTTGCAGCTTCAAGACTGATAAGCCCTTCTCGGATGATATGGCGAGGGTGCATGGAGGAGAGTGTTCTGCATATCAGAGTTTTATAAATCTTAATGTGACGGCGGCCCTGCCGCCGAAGAAGTGGCTGGAGCCAGGAATAGAGTTGGAGTGGGTAATACCGGAGGAGCCGTTTTGCAAGGTCCCGATGGATTGCAAGGAGCTGTTGAACTCAAAGTGTTTGGAGGATCCGACTAATGCTTGGCGAAAGAAGTGCCTTTGCAATGCTGGCTTCAAGTGGGACCCCAGCAATGGTTTGTGTCAACTTAGTAATATTCCACCAAAAACTGTGGGAGCTTCGTTGGGAGCAATAGTATTCATTGCACTGTTAGTGAGCATTGTTCTGTACCAGAAGTATGACAAATCAAAGAGACAAGCCGAGAGGAGGTTAACGAAGCAAAAGGAAAGAATCTTAAATGCAAAAGCCAACTGTGGGCTCTCAGCGAGGATCTTCACAATGAGAGAGATCAAGAAAGCAACCAACAACTTCTCCAAAGACCACCTCATCGGCACCGGCGGCTTCGGAGAAGTCTTCAAAGGAACCTTCGACGACGGAACCATCATAGCCATCAAACGAGCCAAGCTCGGCAACACCAATGCCCTCGACCAAATCCTCAACGAGCTGACTGATAAGAGTGATGTGTATAGCTTTGGGGTGGTGTTGTTGGAGATTCTGACACGTGAGAAGGCGATTGATTTTAATAGGGAAGAGGAGAATGTGAACTTGGTGGTTTATGGGAAGAAGATGATAAAGGATGAGCGGTTTCTGGATATGGTGGATCCGGCGATGAAGGACGGAGCGAGCAACTTGGAGTTGGAGACAATGCAGTCTCTGGGGTTTCTTGCTGTGGCTTGTTTGGATGAAGATAGGCATAATCGGCCTTCCATGAAGGAAGTTTCCGATGAGATTGAGTACCTTATTAGTATTCTTACTAATGACGTTCCCAAAACATAG 1491 0.4795 MVQQRVVPAITLIFTTVVLLSCAGGAAARRCGKCGLNPVPYPLSTGPKCGHPKYNIKCIKGQLWFDCLGGSSYMIKFINAVTRRIIIRPASIAPNMCVSTDFCNEGIHLYKTLPFKIASNNTVFLYNCTNAVLKSKPPLDCAPTDLCHSYIKDHADGGGACLSMGLCCSFKTDKPFSDDMARVHGGECSAYQSFINLNVTAALPPKKWLEPGIELEWVIPEEPFCKVPMDCKELLNSKCLEDPTNAWRKKCLCNAGFKWDPSNGLCQLSNIPPKTVGASLGAIVFIALLVSIVLYQKYDKSKRQAERRLTKQKERILNAKANCGLSARIFTMREIKKATNNFSKDHLIGTGGFGEVFKGTFDDGTIIAIKRAKLGNTNALDQILNELTDKSDVYSFGVVLLEILTREKAIDFNREEENVNLVVYGKKMIKDERFLDMVDPAMKDGASNLELETMQSLGFLAVACLDEDRHNRPSMKEVSDEIEYLISILTNDVPKT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0073 496 Coils Coil 295 322 - -
Lele42g0073 496 Pfam Protein tyrosine and serine/threonine kinase 386 481 IPR001245 GO:0004672|GO:0006468
Lele42g0073 496 SUPERFAMILY Protein kinase-like (PK-like) 326 387 IPR011009 -
Lele42g0073 496 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lele42g0073 496 SUPERFAMILY Protein kinase-like (PK-like) 386 480 IPR011009 -
Lele42g0073 496 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Lele42g0073 496 Gene3D Phosphorylase Kinase; domain 1 299 389 - -
Lele42g0073 496 Gene3D Transferase(Phosphotransferase) domain 1 390 482 - -
Lele42g0073 496 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 386 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0073 Lele-ChrLele42 539760 542361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0073 386 496 Receptor kinase-like Gene Family AT5G02070 61.261 1.17e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele42g0073 PK_Tyr_Ser-Thr 7.6e-06 CL0016