Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0071 ATGGGAGCCACTTCTATGATTAAGTTGCTGAAGAGCCTCTGTGATTCCTCACATTGGAATTATGCTGTATTTTGGAAGCTTAACCACCATTTTCCAATGACTTTGACTTGGGAAGACGGATCCTATGGGGATGTGAAAATCAATGAAGCTGTGGAAAGTATATGGACGGAGGTGGCTTCTTCAAGTTCTGAAGAGAATTCTGTTAGATTACTCATGACTGAAATGTCTCATCTGAAGTACATATTGGGAGAGGGGGTTGTTGGCAAAATAGCTCTTACTGGGGATCATTGTTGGATTTTATTTGAAGATATTCTAACCGATAGATTCCACACTAGGTTGATTAATGAGTGTCCATATGAATGGCTTCTTCAATTTGCAGCAGCTATCAAGACTATTGTACTGGTACCAGTTCTTCCCCAAGGAGTTTTGCAATTCGGCTCATTCAAAGCGGTTGCTGAAGACCTGGCATTTGTTGCCAATGTCAAGGAGAAATTCAATTTCTTTCATTGTGTAACGGCAAGCACTCTGACTTGGAGTTCTGATGAAAATATTCAGGATTGGTCATTCTCTGCTCTAACAGGTTGGCCTCTGGATAATTCAGATGTATCATCTGTTACAAATAGTATCCTGACACACGAACTTTTTGGTGGCAATTCACTTAATATAAAGGAATTGAGGTTGAATCCAACAGTCCCATTGTTTGATCCGGTTGAAGGTTCCACGTCCGGGAAAAATGAGATCAGTCCCCCATCAACAAGGGTGGAAGTCAACTCAAACCAAATGGAAGAAGTGATAGAGACTTGTTCTCCATGGCTCAATAATGTGGGAGTATTTGGAGAGACATCTGAAGCACTGTTTTCTTATTCTCATAAGGATATGGCAAAACAATTTAGAGACACTGGCACTAATTTTGAAGATTATAATATGGTGAACAGTTTCTGCAGTTTTCCGTTGGATTCTGAATTACACAAAGCACTAGGATCTATTGCTAATAGACAAACTTCTGAACCTGAGTCAGAAAATTTCTCTTTTAAGGATACATACAGTACTAGCTCCACGTTGATATCTGGTGAAGAGCATGGTCATATTATGGGTTTACAATTTTCCCACAGACAAAAATCAGAAGACCTTTTGGATGCTGTTGTTTGCAATTTACGTGGTGCCTCCGATGATTCTTTGTCGACGTTGCCAACAGGATTAACTGCTTCCATTCATCCACAAAGTCATTCTGAGGGAAGCACTTTGATAGTAAATAATGCTACTGATTCAAGTAGCCATCTTACATCTGCATTTGGGGCCAACATAGATGATTGCACTGACCTTGTTACATTGGCATCTTTGGATGAAAATTCAAGCATATTGCTTGATAGGACACAGCAAGAATCTGTTCATGCTCATAAGCAGCCCAAGAGTGGACCAAAAATCTTTAGTATTGGCAAGAAAAGAGCCCATGCCGGAAATACACCGAGGCCAAGACCAAGGGACAGACAGTTGATAATGGACCGCATGAAGGAGCTGAGGGAACTTGTCCCAGATGGTGCCAAGTGTAGCATTGACAAACTCTTAGATCGGACCATAAAGCACATGCTGTACTTGAGAGAAATAACAAACCAGGCGGAGAAATTGAAACAATTTGAGCATAGAGAGGTGCCAGAGTTCAAGAAGCAGAAAATCAATGGCAATCATACCGGGAGGAGCTGCGCAATTGACTTTGGCAGTGAACTCCAAGTATGCCCCATAGTTATAGAAGATCTTGAATGCCCAGGTCACATGCTTATAGAGGCGATATGTAGTGAGCATGGACTTTTCTTGGAGATTGCCCAAGGGATTCGACAATTGGAGCTTACCATACTGAAAGGTGTTTTAGAAAGCAGTTCAAGCACTGCCTGTGCCCGTTTCATTGTTGAGGTTCCCAGAGGTTTTCACAGAATGGATGTTCTATGTCCTTTGTTGCATCTTTTGCAGACTGGAAGAAGCCCTGTTTCAAATAGAATTTGA 1998 0.4134 MGATSMIKLLKSLCDSSHWNYAVFWKLNHHFPMTLTWEDGSYGDVKINEAVESIWTEVASSSSEENSVRLLMTEMSHLKYILGEGVVGKIALTGDHCWILFEDILTDRFHTRLINECPYEWLLQFAAAIKTIVLVPVLPQGVLQFGSFKAVAEDLAFVANVKEKFNFFHCVTASTLTWSSDENIQDWSFSALTGWPLDNSDVSSVTNSILTHELFGGNSLNIKELRLNPTVPLFDPVEGSTSGKNEISPPSTRVEVNSNQMEEVIETCSPWLNNVGVFGETSEALFSYSHKDMAKQFRDTGTNFEDYNMVNSFCSFPLDSELHKALGSIANRQTSEPESENFSFKDTYSTSSTLISGEEHGHIMGLQFSHRQKSEDLLDAVVCNLRGASDDSLSTLPTGLTASIHPQSHSEGSTLIVNNATDSSSHLTSAFGANIDDCTDLVTLASLDENSSILLDRTQQESVHAHKQPKSGPKIFSIGKKRAHAGNTPRPRPRDRQLIMDRMKELRELVPDGAKCSIDKLLDRTIKHMLYLREITNQAEKLKQFEHREVPEFKKQKINGNHTGRSCAIDFGSELQVCPIVIEDLECPGHMLIEAICSEHGLFLEIAQGIRQLELTILKGVLESSSSTACARFIVEVPRGFHRMDVLCPLLHLLQTGRSPVSNRI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0071 665 MobiDBLite consensus disorder prediction 459 494 - -
Lele42g0071 665 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 287 659 IPR043561 GO:0003700|GO:0006355
Lele42g0071 665 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 165 IPR025610 -
Lele42g0071 665 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 483 532 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0071 Lele-ChrLele42 507838 512040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0071 480 655 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 48.864 3.42e-46 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0071 42 507838 512040 Lele42g0071 42 507838 512040 ECH
Lele42g0071 42 507838 512040 Lele43g1289 43 21086883 21091865 hybridization
Lele42g0071 42 507838 512040 Lele44g1283 44 21165083 21170981 hybridization